KEGG   Fusarium keratoplasticum: NCS57_00865400
Entry
NCS57_00865400    CDS       T09757                                 
Name
(RefSeq) Pre-mRNA-processing factor 19
  KO
K10599  pre-mRNA-processing factor 19 [EC:2.3.2.27]
Organism
fkr  Fusarium keratoplasticum
Pathway
fkr03040  Spliceosome
fkr04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:fkr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    NCS57_00865400
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    NCS57_00865400
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:fkr03041]
    NCS57_00865400
   04121 Ubiquitin system [BR:fkr04121]
    NCS57_00865400
   03400 DNA repair and recombination proteins [BR:fkr03400]
    NCS57_00865400
Enzymes [BR:fkr01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     NCS57_00865400
Spliceosome [BR:fkr03041]
 Complex B
  Other components
   Prp19 complex
    NCS57_00865400
 Complex C
   Prp19-CDC5 complex
    NCS57_00865400
Ubiquitin system [BR:fkr04121]
 Ubiquitin ligases (E3)
  U-box type E3
   NCS57_00865400
DNA repair and recombination proteins [BR:fkr03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    NCS57_00865400
SSDB
Motif
Pfam: WD40_Prp19 Prp19 Beta-prop_EML_2 WD40 WD40_WDHD1_1st WD40_CDC20-Fz ANAPC4_WD40 WDR55 Beta-prop_WDR19_1st Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_WDR90_POC16_2nd B-prop_COPA_B_2nd WD40_MABP1-WDR62_2nd eIF2A Beta-prop_HPS5 Beta-prop_TEP1_2nd EIF3I Beta-prop_RIG_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 WD40_RFWD3 VID27 V_ATPase_I_N WD40_like PEP5_VPS11_N WD40_MABP1-WDR62_1st DDR_swiveling zf-Nse Beta-prop_SCAP Beta-prop_IFT122_1st U-box TEN_YD-shell WD40_CFAP43 Beta-prop_WDR75_1st NBCH_WD40
Other DBs
NCBI-GeneID: 77686920
NCBI-ProteinID: XP_052912295
LinkDB
Position
6:complement(2158692..2160348)
AA seq 476 aa
MLCGISGEAPQEPVVSKKSGVVYEKRLIEQYINEHGTEPDSGEALTAEDLLPIHSSRIVR
PRPPTLTSIPALLATFQNEWDALALETYNLKEQLARTREELATALYQHDAAVRVIARLSR
ERDEARDALSKVTVTGAAADGDQMMVDSVEKLPEELVAKVDETHQTLSKGRKKRPVPEGW
ATADDISAFENATTHSLPVPEATALSVGGASAAIGGLKGQAVVYATNEDKVEVSIAVEEP
VTDAVWAEDKIAFATGQGSVKVFQEGNQVASLSEHAGAATALSLHPSGTILASVGTDKSI
VFYDLTSQKRVSRAYTDAALTSCAFHPDGHLFAAGTTSGDIKLFMTNTLEQAAVFSLGAP
IQAIAFSENGYWFAATAKGQTMVTIFDLRKEGDAAVAKVLETGGPVQSLAWDYSGQFLAT
GGSSGVTVHQYTKSSKKWSEPLRNSTAAVAIRWGESAKQLVTVNGEGVVSILGAKE
NT seq 1431 nt   +upstreamnt  +downstreamnt
atgctttgtggaatttcaggagaagctcctcaggagcccgtcgtgtccaagaaatccggt
gttgtttacgagaagcgtcttatcgagcagtacatcaacgagcacggcaccgagcccgac
tctggcgaagcgctcaccgcggaagatctcctgcccatccactcgtcgcgtatcgtccga
ccgcgtcctcccaccctcacctccatccccgccctcctcgcaaccttccagaacgaatgg
gacgcgctcgcgctagagacatataacctcaaggagcagctggcgcgcacccgggaggag
cttgccacagctctgtaccagcacgatgccgctgttcgagttattgcccgactgtcgagg
gagcgagacgaggccagggatgcgcttagcaaggtgactgtgacgggcgccgctgccgac
ggtgatcaaatgatggtggacagcgtggagaagctgccagaggagcttgttgccaaggtg
gacgagactcatcaaacactatccaagggtcgcaagaagcgccctgtccccgagggctgg
gctaccgcagacgatatctccgcttttgaaaacgcgaccacacattctcttccagtcccc
gaggccactgcgctcagtgttggaggtgctagcgccgctattggaggtctgaagggccag
gccgtcgtctacgccaccaacgaggacaaggtcgaggtttcgattgctgtggaggagcct
gtgacggacgcagtatgggccgaggacaagattgcctttgctactggtcagggaagcgtc
aaggtgttccaggagggtaaccaggtggcatcgctgagcgagcatgctggtgctgcgaca
gcactgagcctgcaccccagtggtaccatcttggcgtctgtcggcacggataagagcatc
gtgttttatgatttgacttcgcagaagcgtgtcagccgcgcttacaccgatgctgctctt
acttcgtgcgcatttcatcccgatggccacctgttcgccgctggcaccacttctggcgac
atcaagctcttcatgaccaacactctggagcaagccgcagtcttcagcctgggtgccccc
atccaggccatcgccttctccgagaacggttactggttcgcggccacagctaagggccag
accatggtgaccatcttcgatctacgaaaggagggagacgccgcagtggccaaggtcctc
gagactggcggaccagtccagtccttggcctgggactacagcggccagttcctcgccacc
ggtggttcttctggagtgacggttcaccaatacaccaagtccagcaagaagtggagcgag
cccctgaggaattccaccgctgccgttgctatccgatggggagagtccgcgaagcagctg
gtgacagtcaatggcgagggtgtggtcagcatacttggagcgaaggaatag

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