Fusarium keratoplasticum: NCS57_00876600
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Entry
NCS57_00876600 CDS
T09757
Name
(RefSeq) ATP-dependent RNA helicase DBP2
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
fkr
Fusarium keratoplasticum
Pathway
fkr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fkr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NCS57_00876600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fkr03041
]
NCS57_00876600
03009 Ribosome biogenesis [BR:
fkr03009
]
NCS57_00876600
Enzymes [BR:
fkr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NCS57_00876600
Spliceosome [BR:
fkr03041
]
Complex A
U1 snRNP components
U1 related factors
NCS57_00876600
Complex B
NCS57_00876600
Ribosome biogenesis [BR:
fkr03009
]
Eukaryotic type
Pre-60S particles
Helicases
NCS57_00876600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Rod_N
Utp25_C
DUF2443
Glyoxalase_3
ERCC3_RAD25_C
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
77687032
NCBI-ProteinID:
XP_052912402
LinkDB
All DBs
Position
6:2541490..2543995
Genome browser
AA seq
556 aa
AA seq
DB search
MSGYEGGYGGGGRGGGGGGGYGGGGYGRDRSDRGDRNGHGGGGYGGRNNGYGNGGGYGGG
GGGYGGGGYGGGYGGGGGDRMGGLGAGLKQQEWDVSTLPKFEKSFYKEHEDVANRSDAEV
DAFRRKHQMTIAGSNVPKPVETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRD
VVGIAETGSGKTLTYCLPSIVHINAQPLLAPGDGPIVLVLAPTRELAVQIKQEIDKFGRS
SRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGKTNLRRVTYLVLDEADRM
LDMGFEPQIRKIISQIRPDRQTLMWSATWPKEVRALATDFLQDFIQVNIGSMDLAANHRI
TQIVEVVTDMEKRDRMIKHLEKVMENKENKILIFVGTKRVADDITRFLRQDGWPALSIHG
DKQQNERDWVLDQFKSAKSPIMVATDVASRGIDVRNITHVLNYDYPNNSEDYIHRIGRTG
RAGAKGTAITFFTTDNQKQARDLVNVLQEAKQQIDPRLVEMTRYGGGGGRGYGGWGRGRG
GGRANANNMPIGNRRW
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgtctggctacgaaggcggatacggcggtggtggtcgcggcggcggcggcggcggcggc
tacggtggtggtggctacggccgtgatcgcagtgatcgcggtgaccgcaatggtcacggt
ggtggtggttacggaggccgaaacaacggatacggcaacggtggtggctatggcggcggc
ggtggtggttacggtggtggtggttatggaggcggctacggaggcggcggcggcgaccgc
atgggcggcctcggcgctggcctcaagcaacaggagtgggatgtttccaccctgcccaag
ttcgagaagtctttctacaaggagcacgaagacgtcgcgaaccgatctgacgccgaggtt
gatgccttccgtcgcaagcaccagatgacgattgccggcagcaacgtccccaagcccgtc
gagaccttcgacgaggctggtttcccccgatatgtcatggatgaggtcaaggcccagggt
ttccctgcccctaccgccattcagtcccagggttggcccatggctctttcgggtcgcgat
gtcgtcggtattgccgagaccggttccggaaagaccctcacctactgccttccttccatc
gtccacatcaacgcccagcccctcctcgcccctggcgatggtcctattgtcctggtcctc
gctcccacccgtgagcttgctgtccagattaagcaagaaatcgacaagttcggccgatca
tctcgcatccgcaacacttgcgtctacggtggtgttcccaagggtcctcaaatccgtgac
ctctccaggggtgtcgaggtttgcattgccactcctggccgtctgattgatatgctcgag
gctggcaagaccaacctccgccgagtcacctaccttgtgctcgacgaggctgatcgcatg
ctggacatgggtttcgagccccagatccgcaagatcatcagccagatccgacccgaccga
cagactctgatgtggtctgctacctggcccaaggaggttcgcgccctcgccaccgacttc
cttcaggacttcatccaggtcaacattggttccatggaccttgctgccaaccaccgaatc
actcagatcgtcgaggttgtcacggacatggagaagcgtgaccgcatgatcaagcatctc
gagaaggtgatggagaacaaggagaacaagatcctcatctttgttggcacaaagcgtgtc
gccgatgacattactcgattcctccgccaggatggctggcccgcgctttccatccacggt
gataagcaacagaacgagcgcgactgggtcctggaccagttcaagtcggcgaagtccccc
atcatggtggccacagacgtggcctcgcgtggtattgatgtgcgcaacatcactcatgtg
ttgaactacgactaccccaataactcggaggactacattcaccgaattggccgtactggc
cgtgccggtgccaagggtaccgctattacctttttcaccactgacaaccagaagcaagct
cgtgacctcgtcaacgttctccaggaggccaagcagcagatcgacccccgtcttgttgag
atgacccgctacggcggaggcggtggccgcggttacggtggatggggacgtggccgcggc
ggtggcagagccaacgccaacaacatgcccatcggtaaccgtcggtggtaa
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