Fusarium keratoplasticum: NCS57_00895800
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Entry
NCS57_00895800 CDS
T09757
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
fkr
Fusarium keratoplasticum
Pathway
fkr03020
RNA polymerase
fkr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fkr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NCS57_00895800
09124 Replication and repair
03420 Nucleotide excision repair
NCS57_00895800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fkr03021
]
NCS57_00895800
03400 DNA repair and recombination proteins [BR:
fkr03400
]
NCS57_00895800
Enzymes [BR:
fkr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NCS57_00895800
Transcription machinery [BR:
fkr03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
NCS57_00895800
DNA repair and recombination proteins [BR:
fkr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
NCS57_00895800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_5
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
Motif
Other DBs
NCBI-GeneID:
77687224
NCBI-ProteinID:
XP_052912586
LinkDB
All DBs
Position
6:complement(3141554..3145436)
Genome browser
AA seq
1261 aa
AA seq
DB search
MADYEEELSDYDNYDDQEEGITPEDCWTVISSFFESKGLVSQQTDSFDEFTQTTIQDLVN
EYSVISLDQPNPPSPPGVSIALRRYEIKFGSVMVSRPTISETDGTVTSLLPYECRDRNLT
YASPLYIKITKKVSVAVEKEVPLHEMDEDQQAEYKRTGENPTKLIWELEESGDDEGKADD
SWKDMVFVGKLPIMVKSKICHLSSEHDDNLFLVNECPYDQGGYFVINGSEKVLIAQERSA
ANIVQVFKKAQPSPYTYTAEIRSALEKGSRLISSMMLKLYGKGDSARGGFGQTIHTTLPF
VKADLPVAIVFRALGVVSDEDILNHICYDRTDSQMLEMLRPCIEEAFCVQDREVALDFIG
KRGNRDQAGLGREKRVRVAKDILQKETLPHISQSEGSETRKAFFLGYMVHKLLQCALGRR
EPDDRDHFGKKRLDLAGPLLAKLFRGIVRRMNTELSNYLKRCVEGNRHFNLAVGIKPGTL
SNGLKYSLATGNWGDQKKAASSTAGVSQVLNRYTFASTLSHLRRTNTPIGRDGKLAKPRQ
LHNTHWGLVCPAETPEGQACGLVKNLSLMCYVSVGSPSEPLIEFMINRGMEVVEEYEPLR
YPHATKIFVNGVWCGVHSDPKHLVSQVLDTRRKSYLQYEVSLVRDIRDREFKVFSDAGRV
MRPVFTVQQEDDHESGIAKGALVLTKDLVNKLAKEQAEPPEDPSMKIGWEGLIRAGTIEY
LDAEEEETAMICMTPEDLDLYRMQKAGYVVDDDNTDDPNRRLKTKTNPTTHMYTHCEIHP
SMILGICASIIPFPDHNQSPRNTYQSAMGKQAMGFFLTNYSRRMDTMANILYYPQKPLAT
TRSMEFLKFRELPAGQNAIVAIACYSGYNQEDSVIMNQSSIDRGLFRSLFFRSYSDQEKK
VGLNYTEVFEKPFQQSTLRMKHGTYDKLDEDGIVAPGVRVSGEDIIIGKTAPIDQENQDL
GTRTTVHQRRDISTPLRSTENGIVDSVIVTVNADNVKYVKVRVRTTKIPQIGDKFASRHG
QKGTIGVTYRQEDMPFTREGVTPDIIINPHAIPSRMTIAHLIECLLSKVSTLEGMEGDAT
PFTDVTVDSVSELLRKHGYQSRGFEIMYNGHTGRKLRAQVFFGPTYYQRLRHMVDDKIHA
RARGPVQIMTRQPVEGRARDGGLRFGEMERDCMIAHGAAAFLKERLFEVSDAFRVHVCEV
CGLMTPIANLSKQSFECRPCKNKTKIAQIHIPYAAKLLFQELQSMNIAARMFTSRSGVSI
R
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atggctgactacgaggaggagctttccgattatgacaactacgacgaccaggaggagggc
atcacccccgaagattgttggaccgtcatttcatccttcttcgaatccaagggtctcgta
tcgcagcagacagactctttcgacgagtttacgcaaacgaccattcaggatctcgtcaat
gagtattctgtcatctccctagaccagcctaaccctccttcgcctcctggagtgtcgatc
gccttgcgccgatatgagatcaagttcggaagtgtcatggtctcgcgaccgaccatcagc
gagactgacggaaccgttacctcgctgctaccttacgaatgccgtgaccgaaacctgacc
tacgcgagtcccctctatattaagattactaagaaggtgtccgtggccgtcgagaaggag
gttcctctgcacgagatggacgaggatcagcaggcagagtacaagcgaactggtgaaaac
cccaccaagctcatctgggagctcgaagagagtggcgacgatgaaggaaaggccgacgac
agttggaaggatatggtctttgtcggcaagcttcctatcatggtcaagtccaagatctgc
cacttgagcagcgagcacgatgacaacctcttccttgttaacgagtgtccatacgaccag
ggtggatactttgttatcaacggcagtgaaaaggtactcattgctcaggaacgatctgct
gccaacatcgtccaagtcttcaagaaggcccagcccagtccttacacatacactgccgag
attcgaagtgcgcttgagaagggttcacgtctgatctcgagtatgatgctgaagctctat
ggcaagggagactctgcacgaggaggtttcggtcagaccattcacaccaccctgccattc
gtcaaggcagatcttcctgttgccatcgtcttccgagctcttggtgttgtttccgacgag
gatattctcaaccacatctgctacgatcgaaccgacagtcagatgctggagatgttgcgt
ccctgtatcgaggaggccttctgtgttcaggatcgagaggttgcgctcgactttatcgga
aagcgtggaaaccgtgaccaggctggtctcggccgtgagaagcgtgtgcgtgtcgccaag
gacattctccagaaggagaccctgccacacatttcccagtcggagggtagcgagacccgc
aaggctttcttcctaggttacatggtgcacaagcttctgcagtgtgccctgggccgtcgt
gagcccgatgatcgtgatcactttggaaagaagcgcttggatcttgctggtcctctgctg
gccaagcttttccgtggtattgtccgaaggatgaatacggagctttccaactacctcaag
cgatgtgttgaaggcaacagacacttcaacttggctgtcggtatcaagcccggaaccctg
tctaacggtttgaagtactcgctggctaccggaaactggggagaccagaagaaggctgca
agctccactgctggtgtctctcaggtgttgaacagatacacctttgcatccactctttca
catttgcgacgaaccaacacccctattggacgagacggaaagctcgccaagccccgtcag
ctacacaacacccattggggtctggtctgtccagccgagacgcctgagggtcaggcttgt
ggtctggtcaagaacttgtccctgatgtgctacgtcagtgtcggctctccctctgaacct
ctgattgagttcatgatcaaccgaggtatggaagtcgtggaagagtacgagcccctgaga
tacccgcatgctaccaagatctttgtcaatggtgtctggtgcggtgttcactcagacccc
aagcatctcgtcagccaggttctggacacacgacgaaagtcgtacctgcagtatgaggtg
tcgcttgttcgtgacattcgagatcgagagttcaaggtcttctccgacgctggccgagtc
atgaggccggtctttacggttcagcaggaggatgaccacgagtctggtattgccaaggga
gccttggttctgaccaaggaccttgtcaacaagcttgctaaggagcaggcggagccacca
gaggacccatcaatgaagattggatgggagggtctgatccgagccggaaccatcgagtac
ctcgatgctgaggaagaggagacggctatgatttgcatgactcctgaggatcttgatctc
tatcgcatgcaaaaggctggttacgtcgtagatgacgataacacggacgaccccaacagg
agattgaagaccaagacgaaccccacaactcacatgtacactcattgtgagattcacccc
agtatgattcttggcatttgtgccagtatcattcccttccccgatcacaaccagtcaccc
cgtaacacctaccaatctgccatgggtaaacaggccatgggcttcttcctgacaaactac
tctcgccgtatggataccatggccaacattctttactacccgcaaaaacctctggcgaca
acacgatccatggagttcctcaagttccgtgaactgccagccggtcagaacgccattgtc
gctatcgcttgctactctggttacaaccaggaagattccgtcattatgaaccagagtagt
atcgatcgaggcttgttccgcagtctgttcttcagatcctactctgaccaggagaagaag
gtcggtctgaactacacggaagtattcgagaagcccttccagcagtcgacgcttcgtatg
aagcacggtacctacgacaagctggacgaggatggtatcgtggctcccggtgtgcgcgtg
tcaggtgaagatatcatcatcggcaagactgcgccgattgatcaagagaaccaggatctg
ggtaccaggacaacggtgcaccagcgccgtgatatctccacgccgctgcgaagtaccgag
aacggtatcgtcgattcggtcattgtgactgtcaatgccgacaacgtcaagtacgtcaag
gtccgtgtgaggacgaccaagattcctcagattggtgacaagtttgcctctcgtcacgga
cagaagggtaccattggtgtcacctaccgacaggaggatatgccctttaccagggagggt
gtgacaccagacattatcattaacccccacgccattccgtcgcgaatgacaattgcacat
ttgattgaatgcctcctcagtaaggtgtcaacactcgaaggcatggagggtgatgcaaca
cctttcaccgatgtcactgtcgactccgtttcggagctgcttcgaaagcacggctaccag
tctcgaggtttcgagatcatgtacaacggtcatactggacgcaagcttcgagcgcaggtg
ttcttcggacctacctactaccagcgactccgtcacatggtggacgacaagatccacgcc
cgagctcgtggtcccgttcagatcatgactcgacagcccgtcgaaggtcgtgcccgagat
ggtggtctgcgattcggagaaatggaacgtgattgtatgattgcccacggagcagccgct
ttcctgaaggagcgtctgtttgaagtttcggatgccttcagagtccacgtctgcgaggtt
tgtggactcatgacaccgattgccaacctttccaagcagtcgttcgaatgccgaccttgc
aagaacaagaccaagattgcgcagatccatattccttacgctgccaaactgctcttccag
gagctgcagtctatgaacatcgcggcaagaatgtttaccagccgctccggagtttcaatt
cgttaa
DBGET
integrated database retrieval system
