Fusarium keratoplasticum: NCS57_01048800
Help
Entry
NCS57_01048800 CDS
T09757
Name
(RefSeq) DNA-directed RNA polymerase subunit
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
fkr
Fusarium keratoplasticum
Pathway
fkr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fkr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NCS57_01048800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fkr03021
]
NCS57_01048800
Enzymes [BR:
fkr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NCS57_01048800
Transcription machinery [BR:
fkr03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
NCS57_01048800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_1
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
77688754
NCBI-ProteinID:
XP_052910627
LinkDB
All DBs
Position
8:complement(2180948..2186026)
Genome browser
AA seq
1674 aa
AA seq
DB search
MNIAQPVASGVESVEFTFLSPKEIRSISVKRIENDSTFDNLLNPVPGGLYDPALGSWGDA
PCTTCNLNQSTCPGHAGHIQLPVPVYHPVFMDQAYRLLKAACVYCKGFRLPQKELHKYVC
KLKLLQHGLIQEAHIVGAIGENDLAIELGDFSGLESEAEEEGDSNSIDNVTRARDRYVDK
CLRGIKVKRGETKRGKHEGASEMRREIIKEFLAEITKRRICASCGGISPSYRKDRFVKVF
ERSLSDKEKAKMAQKNFKQADAMARVHQATTKQRPDGYSSDEGVADVGSPTREKAQADED
GADQDIDMPDADTAAAAVPQRYISAMEVQARLNELFTKEQELMALLYNAKPATRSSSKVT
PDMFFLTILMVPPNRYRPEARTGDSQISEAQQNSLYKNILRGCGRIAQLHAHLQEERADV
NQLHQAWTELQESVNALIDKDKNPVQGAAAKRNEDGIKQKLEKKEGLFRKNMMGKRVNYA
ARSVISPDPNIETNEIGVPPVFAKKLTYPEPVTSHNFRDMQQAVINGVDKWPGAFAIENE
NGQIVNLRNKSVDDRVSLANQLLAPTSSNAARTRNKKVYRHLTNGDVVLMNRQPTLHKPS
IMGHRVRVLPNEKTIRMHYANCNTYNADFDGDEMNMHFPQNEVARAEALQIADTDHQYLS
YTAGKPLRGLIQDHISVSVALCNRDTFFSRGDYQQLVYNALRPESGHIVGERIELVAPAV
IRPVPRWTGKQVITTILKNMQPPNCGGLCMRAETQIKASQWGKDSEEGVVLFQDGEFITG
ILDKSQIGPSSGGVVHAVHEIYGPAIAGKLLSSLGRLLTRYLNVRAFSCGMDDLRLTPEG
EKARREALVPANTVGLKVASSYVSLEQNPGPRDPLLLERLEEVMRDDSKQEGLDLLMKEG
LSGITDKVQTACVPNGLEKPFPKNQMQAMTTSGAKGSRVNASLISCNLGQQVLEGRRVPI
MVSGKSLPCFNPFETHARAGGYIVQRFLTGIRPQEYYFHHMAGREGLIDTAVKTSRSGYL
QRCVIKGMEGLTVAYDTTVRDADGSMIQFLYGEDGLDVTKQKYLNDFSFILENVTSQAAQ
LKYDPSIGDRLGQHREAIAKYMKKALKHVKAHDPKAQDPLSSMFNPATTAFATSENFYQA
MTSYLKENKDGLVRDKSDKKKLALSRVSLNRKNAEMLFAMKYLRSLVEPGEAVGIVAGQS
VGEPSTQMTLNTFHLAGHSAKNVTLGIPRLREILMTASDKISTPAMSLYPIDEMSTADAE
TFAKSISVLPLGYILDSISVEEKVGRGKMYGSAKVYRVDLKFFASEEYTKTYAISVSDVM
DAVERKLLHRLLSLVKKDIKKRRSQSTMATPEIGVKAGVVETAAPNAEAIRDEDDDDDEG
DDDATNAKQRANRTEAVSYGPNDDDDDAVQQEMARDATDDMDEDEGIGGSPRMAPVDDDD
DEDGIDWSAKARTERVLDSYAEVTDFTFDAKSGNDCSFTLEFDSTIPKVLMLNLVQEAVK
KTVVQEISGVGACTFVEEKGVRVIHTAGVNLQAMQRYSDFIDPHRIQTNDIAAVLAVYGV
EAARSNIVQELAGVFGSHGIKVDNRHLNLIGDHMTRNGGFTPFNRMGLKGNVSPFTKMSF
ETTLSFLKDAVLDGDWDDLATPSGRSVMGKLGKVGTGGFDVLAQLPTYHVDSLA
NT seq
5025 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcgcacaacctgtcgcctccggggtggagagtgtcgagtttacgttcctgtcg
ccaaaggagatccgatccatttcggtgaagcgaatcgagaacgacagtaccttcgacaac
ctcctcaatccagtaccaggcggcctgtacgatcctgcgctcggttcttggggtgatgcg
ccatgcacaacttgtaacttgaaccagtctacgtgccccggccatgccggacacatccaa
ctccccgtccctgtctatcacccagtatttatggaccaggcctatcgactcctcaaagcc
gcctgcgtctactgcaagggctttcgactcccccaaaaagaattgcacaagtatgtgtgc
aagctgaagctcctccagcatggcttgattcaggaagcgcacattgttggcgccattggc
gagaatgacctagccatcgagctgggtgacttttcaggactggaaagtgaggctgaggag
gagggtgacagcaattccatcgacaacgtcactcgcgcaagagacagatatgtcgacaag
tgtcttcgcggcatcaaggtcaagcgaggcgaaacgaagcgaggaaaacacgagggcgca
agcgaaatgcgacgagagatcatcaaggaatttcttgccgagatcaccaagaggagaata
tgcgccagctgtggcggtatctccccatcctatcgcaaggatcgctttgtcaaggttttc
gagagatccttgtcagacaaggagaaggccaagatggctcagaagaacttcaagcaagcc
gacgccatggcgagagttcaccaagctacgacaaagcagaggccggacggatattcatcc
gatgagggtgttgcggatgtgggctcaccaactcgcgaaaaggcacaggctgatgaggat
ggtgctgatcaagatatcgacatgcccgacgccgacaccgctgctgctgccgtcccgcag
aggtacatcagtgcgatggaagtccaagcacgcctgaacgagcttttcaccaaggaacag
gaactaatggctcttctttacaacgccaagcccgcaacacgaagctcctccaaggttact
ccggacatgttcttcctgacgatcctcatggtaccgcccaaccgataccgtccagaggct
cgtacgggcgactcccaaatctcggaggctcaacagaactcgctgtacaagaacattctt
agaggttgcggaagaattgcccaacttcatgcgcatctccaggaagagcgagcagatgtc
aaccagcttcaccaggcctggaccgagttgcaagagtcagtcaacgccctcattgacaag
gataagaacccagttcagggcgccgcggcaaagcgcaatgaagacggtatcaagcagaag
cttgagaagaaggagggtctgttcagaaagaacatgatgggcaagcgagtcaactacgcc
gctcgaagtgtcatctcgccggatcccaacatcgagaccaacgaaattggtgttccgcct
gtgttcgccaagaagctcacatatcccgaaccggtgaccagccataatttccgcgacatg
cagcaggccgtcatcaacggcgtggacaagtggcccggcgctttcgcgatcgagaatgag
aacggacaaatcgtcaaccttcgaaacaagtccgttgacgaccgcgtgtcactggcaaac
cagcttctcgctcctacaagcagcaacgccgctcgaaccaggaacaagaaggtctatcgc
cacctcaccaacggtgatgttgtcttgatgaaccgtcagccgaccctgcacaagccgtcc
atcatgggacatcgagtacgagttctgccgaatgagaagacgattcgaatgcactacgcc
aactgtaacacctacaacgccgatttcgatggtgatgaaatgaacatgcatttcccccag
aacgaagttgcccgagcggaagctcttcagattgccgacaccgaccatcagtacctgtcc
tacaccgcaggcaagcccctccgaggtctcattcaggatcacatttccgtgtccgtcgcc
ctctgcaaccgagacacgtttttcagccgcggtgactatcaacagctggtgtacaacgcc
ttgcgccctgaaagcggacacatcgtcggcgagaggattgagcttgtcgccccagccgtg
atccgaccagttcccaggtggactggcaagcaagtcatcaccactatcctcaagaacatg
cagccacccaactgtggcggtctttgcatgagggcagagactcagatcaaggccagtcag
tggggtaaagactcggaagagggtgtcgttctattccaggatggcgaattcattactgga
atcttggacaagtcgcagattggtcccagttcgggtggtgttgtccacgctgttcatgag
atttacggtcctgctattgcaggcaagctgctcagcagtctcggcagattgctgaccagg
tacctcaacgtgcgagccttttcctgtggtatggacgatctgcgactcacccccgaagga
gagaaggcccgacgagaagcgcttgtacctgccaacacagtcggtctcaaggtcgcttcg
tcgtacgtctctctggagcagaaccctggtccccgtgatcccctgcttcttgagcgtctc
gaggaggttatgcgcgacgacagcaagcaggagggtctcgatcttctgatgaaggagggt
ctcagtggcatcacggacaaggttcagactgcatgcgttcccaacggtctggaaaagcca
ttccccaagaaccagatgcaggccatgacaacatctggtgcaaagggatcccgagtcaac
gcatccctgatttcttgtaaccttggtcagcaggttttggaaggcagacgtgtacctatc
atggtcagcggcaagtcgctgccatgcttcaacccattcgagactcatgctcgagcgggc
ggctacatcgtgcagcgcttcttgactggcattcgccctcaggaatattacttccatcac
atggctggccgagaaggtctgatcgatacagctgtcaagacatccagatccggatatctg
cagagatgtgtcatcaagggcatggagggcctgaccgtcgcctacgatactaccgtgcga
gatgctgatggctccatgatccagttcctatatggagaggatggtcttgatgtgaccaag
caaaagtatctgaacgacttcagcttcattctggagaacgtcacctcccaggctgctcag
cttaagtacgaccctagcattggagatcgactcggacagcaccgagaagccatcgccaag
tacatgaagaaggccctcaagcatgtcaaggcccatgaccccaaagctcaggacccactc
tccagcatgttcaacccggcgaccactgcctttgctacctcagagaacttctatcaagcc
atgacctcctatctcaaggaaaacaaggacggtctggtgcgggacaagtcggacaagaag
aagctcgctctttctcgcgttagtctcaacaggaagaatgccgagatgttgtttgcgatg
aagtacctacgatctcttgtcgagcctggcgaggctgtcggtatcgtggcaggccagtct
gttggtgagccttcaacacagatgacactgaacacgttccatttggctggtcactcggcc
aagaacgtcactctgggtattccgcgattgcgagaaattctcatgactgctagtgacaag
atttctacgccagccatgtccctttacccgattgatgagatgtccacggcggacgcggag
acgtttgccaagtccatctcggttctgcctctgggctacattctggatagcatctcagtc
gaggagaaggttggacgtggcaagatgtacggttccgccaaggtttaccgggttgacctc
aagtttttcgcctccgaggagtacacgaagacgtatgccatcagtgtctcggacgtcatg
gacgccgttgagcgaaagctgctccaccgtcttctttctcttgtgaagaaggacattaag
aagcgacggagtcagtctaccatggccacgcctgagatcggtgtcaaggccggcgtggtg
gaaacggcggcacctaatgccgaagccatccgggatgaggacgacgatgatgacgaaggc
gatgacgatgccacaaatgccaagcagcgggctaaccggaccgaggcggtatcctacggc
cccaacgacgacgacgatgatgctgttcagcaggagatggcacgtgacgctactgatgac
atggacgaggacgaaggcatcggaggtagcccgcgtatggcccctgtcgatgatgatgat
gatgaagacggcatcgactggtcagcaaaggcacgaaccgagcgcgtgctggattcatac
gccgaagtcacggactttacattcgacgcaaagagtggaaacgactgcagcttcaccctc
gagtttgactcgactatccccaaggtcctcatgctcaatcttgtgcaggaggctgtcaag
aagacggtggttcaggagatctccggcgtgggagcctgcacctttgtggaagagaagggc
gtccgcgtcattcacacggcgggagtgaacctacaggcgatgcaaagatacagcgatttc
atcgacccccatcgaatccagaccaacgacattgcggccgtgctggcagtatacggtgtt
gaggcggctcgcagcaacatcgtccaggagctggctggtgtcttcggatcccacggcatc
aaggtcgacaaccgccacctgaacctgattggcgaccacatgacgaggaacggtggattc
acgccgttcaaccgaatgggtctgaagggcaacgtcagccccttcaccaagatgagtttc
gagacgacactgtcgttcctcaaggatgccgtgctcgacggcgattgggatgacctcgcc
acgcccagcggtcggtcggtgatgggcaagcttggaaaggttggcacaggagggttcgat
gttttggcgcagcttcctacataccatgttgattctctggcgtaa
DBGET
integrated database retrieval system
