Fusarium keratoplasticum: NCS57_01127800
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Entry
NCS57_01127800 CDS
T09757
Name
(RefSeq) DNA polymerase
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
fkr
Fusarium keratoplasticum
Pathway
fkr03030
DNA replication
fkr03410
Base excision repair
fkr03420
Nucleotide excision repair
fkr03430
Mismatch repair
fkr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fkr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCS57_01127800
03410 Base excision repair
NCS57_01127800
03420 Nucleotide excision repair
NCS57_01127800
03430 Mismatch repair
NCS57_01127800
03440 Homologous recombination
NCS57_01127800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fkr03032
]
NCS57_01127800
03400 DNA repair and recombination proteins [BR:
fkr03400
]
NCS57_01127800
Enzymes [BR:
fkr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCS57_01127800
DNA replication proteins [BR:
fkr03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
NCS57_01127800
DNA repair and recombination proteins [BR:
fkr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
NCS57_01127800
MMR (mismatch excision repair)
DNA polymerase delta complex
NCS57_01127800
BRITE hierarchy
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
DNA_pol_B_2
DUF2614
DNA_pol_B_exo2
Motif
Other DBs
NCBI-GeneID:
77689544
NCBI-ProteinID:
XP_052909384
LinkDB
All DBs
Position
9:complement(1255286..1258765)
Genome browser
AA seq
1104 aa
AA seq
DB search
MASAVLPQKRVLGETLTRQNIPSSPSSIKKRKVDAFPSSPAAARAPSSQNDHRSKMNSSQ
PKSAFESEVLEKLSQDLSDRKKNNTEKDQAWERPPVVDFEPERDNLCFQSIEAEEGTLHG
GRTTVKLFGVNEAGNSVMLHVTDFKHYLYVPAPVNFQPQDCAAFKAYLETQVAQHQPTIH
SVAFAMRENIYGFQGNQSKPYLKVTVTDPKFINKVRSTIQHGNANWKRMWKNDGEIQTFD
NIQYVLRFMVDCKVRGMSWVEAPAKTFKLLPENLRQSNCQIEAEVSYLDLIAHEPVGEWS
KMAPLRILSFDIECAGRKGIFPEANHDPVIQIANIVTKYGEKKPFVRNVFCLQETSSIVA
TQILEFEKEEKMLSEWQKFLITTDPDIITGYNISNFDFPYLLDRARHLKVSGFEYWTRIP
SVASKAKETNFSSKQMGNRDTKATNTNGRLQLDMLQLIQRDHHLRSYTLNSVCANFLGEQ
KEDVHHTMITELFNGTPESRRRLALYCLKDAYLPQRLMDKLSCLENYTEMARVTGVPFNF
LLSRGQQIKFISQLFRKALEQKLVIPNLKSEASDEQYEGATVIEPTRGYYDVPIATLDFA
SLYPSIMQAHNLCYTTLVSKKAIEAFGLKKDEDYIVTPNGDTFVTVKQRKGLLAQILEEL
LAARKQAKRELAVEKDPFKKAVLNGRQLALKISANSVYGLTGATTGKLPCLEIASSTTSF
GRKMIEKTKEEVENRYNIANGYSHDAQVIYGDTDSVMIKFGTKDLREAMKLGEEASKYVS
DKFVKPIKLEFEKVYFPYLLINKKRYAGLYWTKPEKYDKMDTKGIETVRRDNCLLVQTVI
EKVLRMILIDQDVQGAQEYVKETIADLLQNKVDMSKLVITKALTKDDYAAKQAHVELAQR
MKKRDAGSAPGLGDRVAYVMVRGAAGAKNFEKSEDPIYVLEHNVPIDTRYYLDNQLAKPL
GRIFEPILGETKARSLLTGDHTRTISVAAPTVGGLMKFAKKTQTCMGCKKPLTGKEEAQG
AVCSNCAPRVGELYKKTLDRVSDLEVRFGRLWTQCQRCQGSMHCEVICSSKDCPIFYMRM
KAKKDLEDAGRELSRFDADQAAIW
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcgctgtcctcccccagaagcgggtgctgggcgagaccctcacccgtcagaat
attccatcttctccttcatcgatcaagaagcgcaaggtcgatgccttcccgtcctcgccg
gccgccgctcgagcacctagctcgcagaacgaccaccgatcaaaaatgaactccagccag
cccaagagtgccttcgagtctgaagttctcgagaaactgagccaggacttgtcggaccgg
aaaaagaacaacacagaaaaagaccaggcatgggagcgaccgcctgtcgtcgacttcgag
cccgagcgagacaatctttgtttccagtctatcgaggccgaagaggggacattgcacggt
ggaaggacaaccgtcaagctctttggtgtcaacgaagccggcaattcggtaatgctgcac
gtcaccgatttcaagcactacctgtacgttcctgcccctgtcaatttccaaccgcaagat
tgcgccgccttcaaggcatatttggagacacaggtggctcagcaccagccgaccatccat
tctgttgcctttgccatgagagaaaacatctacggattccagggaaaccaatccaagcca
tacctcaaggtcacggtgacggatcccaagttcattaacaaggttcgatcaaccatccaa
catggcaatgccaactggaagcgtatgtggaagaacgacggcgagatccagacattcgat
aacatccaatatgtgctacgattcatggtggattgcaaggtccgaggaatgtcttgggtg
gaagccccggcaaagaccttcaagctccttcccgagaaccttcgccaatccaactgtcag
atcgaggccgaagtgagttatctcgacctcatcgctcacgagccggtcggtgaatggtcc
aagatggcacccctgcgaatcctgtccttcgatatcgagtgtgctggccgaaagggcatc
ttcccggaagcaaaccacgaccccgtcatccagatcgccaacattgtgacgaaatacgga
gagaagaagccctttgtccgaaacgtgttttgcctccaagagacaagttccattgtggca
actcagattctcgagttcgagaaagaggagaagatgctcagcgaatggcaaaagttcctg
atcacgacggaccctgatatcattaccggctacaacatttcgaacttcgatttcccctac
ctcctggatcgagcaagacatctcaaggtcagcgggtttgaatactggactcgaatcccg
agcgtggcgtccaaggccaaggaaaccaacttttcgagcaagcaaatgggcaacagagac
acgaaagccaccaacacgaacggtcgacttcagctggatatgttgcaactgattcagcga
gatcaccatctccgaagttacaccctgaactcggtgtgcgccaatttcttgggcgagcag
aaggaggatgtccaccacaccatgattacagagctcttcaacggtacccccgaatcgaga
cggcgtcttgcgctgtactgcttgaaggatgcctatctcccacagaggctgatggacaaa
ctctcgtgtctggaaaactataccgaaatggcgagagtcacgggtgtgccgttcaacttc
ttgctatctcggggtcagcaaatcaagttcatcagtcaactcttccgaaaagccctggag
cagaagctcgtcatccccaatctcaagtctgaagcgtccgatgagcaatacgaaggagcc
acagttatcgagcctacgagaggctattatgacgttccgattgccacactggatttcgct
tctctgtaccccagtatcatgcaagctcacaacctttgctataccacgttggtgagcaag
aaggcgatcgaagcgtttggcctcaagaaggacgaggactacatcgtcacgccaaacggc
gacacctttgtgactgtgaagcaacgcaagggtttgctggcgcaaattctcgaggaattg
cttgctgcccgaaagcaggccaagcgcgaattggcggttgaaaaggatcccttcaagaag
gctgtgttgaacggtcgccagctggctctgaagatcagcgcaaacagtgtgtacggcttg
acaggtgcgacaacaggaaagcttccctgtctggagattgccagtagcacaacgagtttt
ggccgcaagatgattgagaagaccaaggaagaggtggaaaaccgatacaacatcgccaac
ggctactcgcacgacgcccaggttatttacggtgatacggattcggtcatgatcaagttc
ggcaccaaggacctgagagaagccatgaagctcggcgaggaggcgtcgaaatacgtgtcg
gacaagtttgtgaagcccatcaagcttgagttcgagaaggtgtacttcccatacctgctc
atcaacaagaagcgttatgcaggtctgtactggacgaagccagagaagtacgacaagatg
gacaccaagggtatcgagacggtccgacgtgacaactgtctgctggtgcagacggtgatt
gagaaggtgctgcgaatgattctgatcgaccaggacgtccaaggcgcacaagaatatgtc
aaggagacgattgcggatctgctgcaaaataaagtcgacatgtcgaaattggtcattacc
aaagcgctcacaaaggacgattatgcagcaaaacaggcccacgtcgagctggctcagcgc
atgaagaagcgcgacgcgggctcggccccgggactcggtgaccgagtggcctacgtcatg
gtccgaggcgccgccggcgccaagaacttcgagaaatcggaggaccccatctacgtgctg
gaacacaatgtgccgatagatacgcgctactatctggacaaccaactggccaagccactg
ggccgtatcttcgagccgattctcggggagactaaggcacgctcgcttctgacgggagac
catacgcgcaccatctcggttgcggctcccaccgtcggtggcctcatgaagtttgcaaag
aagacgcagacctgcatgggctgcaagaaacctctgacaggcaaggaggaggctcaggga
gcggtgtgctctaactgcgcacctcgcgtgggagagctctacaagaagacgcttgatcga
gtttcggacctcgaggtgcgttttgggcgactgtggacccagtgccagcgctgccagggc
agtatgcactgcgaggttatctgcagcagcaaagattgccctatcttttacatgcgcatg
aaggccaagaaggacctggaggacgcgggccgtgaattgtctcgcttcgacgccgaccaa
gcagctatctggtaa
DBGET
integrated database retrieval system