Fusarium keratoplasticum: NCS57_01132600
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Entry
NCS57_01132600 CDS
T09757
Name
(RefSeq) hypothetical protein
KO
K07573
exosome complex component CSL4
Organism
fkr
Fusarium keratoplasticum
Pathway
fkr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fkr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCS57_01132600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fkr03019
]
NCS57_01132600
Messenger RNA biogenesis [BR:
fkr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
NCS57_01132600
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
NCS57_01132600
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
PCB_OB
Motif
Other DBs
NCBI-GeneID:
77689592
NCBI-ProteinID:
XP_052909432
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Position
9:complement(1409243..1409917)
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AA seq
208 aa
AA seq
DB search
MALDEVPPIAMPGKVLGPVTKFAPGPGTHVYEGNVVSSLLGKVTVTQPAKAAGPAKRLNK
ITAPTTEELATVSVSRHGRKREVLPDVDNIVLARVLRLMPKQAIVVIQQVGDTVLETEWQ
GVIRVQDVRATEKDKVKIYESFKPGDIVRAQVISLGDQANYYLSTASNELGVIMALSEAG
NDMVPLSWKEYQDPETGITEPRKVAKPS
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggccctcgacgaagtccccccgattgccatgccaggcaaagtcctaggcccggtcacc
aagtttgcgcccggccccggcacgcacgtctacgaaggcaatgtcgtctcatctttgctc
ggcaaggtcaccgtcacacaaccggccaaggcagccggtcctgccaagcgactgaacaag
atcaccgccccgaccaccgaagagcttgcgaccgtctccgtgtcccgccacggccgtaag
cgcgaggtccttcccgacgtcgacaacattgtactcgcccgtgttctgcgactcatgccc
aagcaggccatcgtggttatccagcaggtcggcgacacggtgctcgagactgagtggcag
ggcgttatccgagtgcaggatgtgagggcaacggagaaggacaaggtcaagatttatgaa
tcttttaagccgggtgatattgtccgagcccaagtgatctccctcggtgaccaagcaaac
tactatctctcaacagcttcaaacgaacttggtgtgataatggctctgagcgaggcgggc
aacgacatggttcccttgagttggaaagagtatcaagatcctgaaacgggtataaccgag
ccccgaaaggtcgcaaagcccagctga
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