KEGG   Fusarium keratoplasticum: NCS57_01137800
Entry
NCS57_01137800    CDS       T09757                                 
Name
(RefSeq) 5'-3' exoribonuclease 1
  KO
K12618  5'-3' exoribonuclease 1 [EC:3.1.13.-]
Organism
fkr  Fusarium keratoplasticum
Pathway
fkr03008  Ribosome biogenesis in eukaryotes
fkr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:fkr00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    NCS57_01137800
  09123 Folding, sorting and degradation
   03018 RNA degradation
    NCS57_01137800
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fkr03019]
    NCS57_01137800
   03009 Ribosome biogenesis [BR:fkr03009]
    NCS57_01137800
   03016 Transfer RNA biogenesis [BR:fkr03016]
    NCS57_01137800
   03036 Chromosome and associated proteins [BR:fkr03036]
    NCS57_01137800
Messenger RNA biogenesis [BR:fkr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     NCS57_01137800
  mRNA degradation factors
   5'-3' decay
    5' exonucleases
     NCS57_01137800
Ribosome biogenesis [BR:fkr03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    NCS57_01137800
Transfer RNA biogenesis [BR:fkr03016]
 Eukaryotic type
  tRNA degradation factors
   Rapid tRNA decay (RTD) pathway factors
    NCS57_01137800
Chromosome and associated proteins [BR:fkr03036]
 Eukaryotic type
  Gene silencing
   piRNA pathway
    NCS57_01137800
SSDB
Motif
Pfam: XRN_N XRN_M XRN1_D2_D3 XRN1_D1 SH3_12 R3H Phage_holin_T
Other DBs
NCBI-GeneID: 77689644
NCBI-ProteinID: XP_052909481
LinkDB
Position
9:complement(1617462..1621885)
AA seq 1400 aa
MGVPKFFRWLSERYPAISQLIAENRIPEFDCLYLDMNGIIHNCTHKDAGEDVSFRLSEEE
MFIRIFNYIEHLFGKIKPKQLFFMAIDGVAPRAKMNQQRARRFRTALDAEKAREKAIREG
IELPKEEPFDSNCITPGTEFMAKLSQQLRYFVNKKVSEDTDWQGCEIVLSGHEVPGEGEH
KIMEYIRNAKAQPNYNPNVRHCLYGLDADLIMLGLLSHDPHFCLLREEVTFGRDSKNKSK
ELEHQNFYLLHLCIVREYLEMEFQELQEEGALSFPFDLERVIDDFILMAFFVGNDFLPNL
PGLHINEGALANMFRIYKTILPKGDGYINENGVINLERLQLLLGELSKTEIDNFENDVSD
EKWFAAKQIEKDIGNKGASGRKPPKGGQIVITSAQRDLWKQKIRPYISKRSDEPLDLGTS
LKAADRKFVQDLADSMHLQWSTKEDDEGHRHLIVSFPPKIDDDDEEEEEEGNLAAYRVMK
TYDKALVVDMTPEDAEKHYEKLYQDKYQGWKTKYYLQKFEEWAPEKYDKELIALCENYVQ
GLQWVLYYYYRGIASWPWFYGYHYAPLISDVAKGVGADFNFQKGQPFKPYEQLMGVLPDR
SKKIVPKVYHDLMTNPDSPIIDFYPRDFELDMNGKRMDWEAVVKIPFIDEKRLLSAMATK
NDNLEPDEKARNGFGVPLKFTYSPDVDFVYPSPLPGVFPEVQNCRCIENIFDLPDMEGLD
YLAGLTTGALLNVDALAGFPSLHTLPYTAQLLGGFGVNVFQQDSKNPSVIVTLTDTENRT
KTETWKAKLGQRCFVGYPFLQEAKVMKVQDELFSYELADNGKDIVTKDHNNREAADWARE
SDFLENMHSKRFGIIIGQVECLIYVHMLKGLIRTEEGALIKEYAENPSLRSTYAAQTIVD
EVVNEDERFLEKAALPIEEEFPQGTRAFFLGEYAYGRPLEVTAHTNNKAEIVVSMLKNKE
PEFAKQIIHQAERNNPYTPSFAVAKQLGVHPLVLSKITSSYQVINSGGFKLNLGLNLKFE
GRKQKVLGYSRKSHTGWEFSGLAIQLIANYMVTFPDFFAAIQREPQKSDVYETDLWQDPA
VASQKVKEIAAWLKTQKTNQFERVPLEAEQLDSVVVQALATVGEQIHVASQEIDIKKLRG
VPRSALLKPSDAEMVLGSQNFALGDRVTYVSAAGKVPIATRGTVVGISRTATALLLDVVW
DTAFMSGTTLNERAPMFRGQTVAASAVLNTTDKQVVSTTSRSQQRRPVATAPAGGYQNVG
HPQYRDAPAPAPLRGGWRGALNGTPSRGRGNGARGGGPNLVHSTLVYRNGPPDGAHQGQD
NNGHGHRGRGSAHSNGRGRGRGNLHGSPAPDAGEQKYGNVPPPASLDQPRGRGRSRGRGG
RGRGGRGRGNGGAAGNATQG
NT seq 4203 nt   +upstreamnt  +downstreamnt
atgggtgtccccaagttcttcagatggctctccgagcgctatcccgcaatctctcaactc
atcgcagagaaccgaatacccgagttcgactgcctctacctggacatgaatggtatcatt
cataactgtacccacaaggatgcaggtgaagacgtatcctttcgcctcagcgaggaggaa
atgttcatccgcatattcaactacattgaacatctgtttggcaagatcaaacccaagcaa
ctcttcttcatggctatcgacggtgtcgcaccgcgagccaagatgaaccagcagcgtgct
cggcgtttccgaaccgctctcgatgccgaaaaggcccgtgaaaaggccattcgcgaaggc
atcgagttgcccaaggaggagccctttgacagcaactgcatcacccctggcactgaattc
atggccaagctatcacagcagctgcgatactttgtcaacaagaaggtatctgaggatact
gattggcagggttgtgagattgtgctttccggccacgaggtccctggtgaaggagagcac
aagatcatggagtacatccgaaatgccaaggcccagcccaactacaaccccaacgtgcga
cattgcctttacggtctcgatgctgatctgatcatgctgggtctcctcagccacgatccc
catttctgccttcttcgagaggaggtgacatttggacgtgattcaaagaacaagtccaag
gagcttgagcatcagaacttctacttgctccatctttgcatcgttcgagagtatctagag
atggagtttcaagaacttcaagaagaaggcgctctcagtttcccattcgacctcgaaaga
gtcattgacgacttcattcttatggccttttttgtcggcaacgatttcttgcctaacctg
cccgggctacacatcaacgagggagcattggcaaacatgttcaggatctacaagaccatc
ctacccaagggtgacggatacatcaacgagaatggagtcatcaatttggagcgtctacag
ctcctgcttggcgagctgtcgaaaacagagatcgacaacttcgagaacgatgtttcggat
gaaaagtggtttgccgcgaaacagatagaaaaggacattggaaacaagggtgcttctggg
cgcaaaccccccaagggaggacagattgtcatcacctccgcgcaacgggatctttggaag
caaaagatccggccctacatctctaagcgctctgatgagcctctggatctcggcaccagc
cttaaggctgctgaccgtaagttcgtccaggatttggcagattctatgcacctccaatgg
tcaaccaaggaggacgacgagggccaccgtcatctcatcgtgtccttccctcccaagatt
gacgatgacgacgaagaggaggaggaggaaggcaacctggctgcctaccgagtaatgaag
acgtacgacaaggccctggtggtcgacatgacccctgaggatgctgaaaagcattacgag
aaactctaccaagacaagtaccaaggctggaagaccaagtattaccttcagaagtttgaa
gagtgggctcctgaaaaatacgacaaggagcttatcgcgctgtgcgagaactatgtgcaa
ggcctgcaatgggtcttgtactactactaccgtggaattgcctcgtggccctggttctac
ggatatcactatgcgcctctcatctcagatgttgccaagggtgttggcgccgacttcaat
ttccagaagggtcaaccgtttaagccgtacgaacagctcatgggtgtcttgccagaccga
agcaagaagattgtgccaaaggtctaccatgacctcatgactaaccccgactctcccatc
atcgacttttatcctcgcgactttgagctggacatgaacggcaagaggatggactgggaa
gctgttgtcaagatccccttcattgatgagaagcgcctattgtcagctatggcgacgaag
aatgataacctggagccggacgaaaaggctcgaaacggttttggtgtccccctcaagttc
acttactcacctgacgtggactttgtctacccgtcgcctctccctggcgttttccccgag
gttcaaaactgccggtgtatcgaaaacatcttcgatcttcccgacatggagggccttgat
taccttgccggactgacaactggcgctttgctgaacgttgatgctcttgctggcttcccc
tcgctgcatactcttccctacactgcccagcttctcggaggatttggtgtcaacgttttc
caacaggacagcaagaatccaagtgtcattgttaccttaactgatacggagaaccgcacc
aagacagaaacctggaaggcaaagctgggccagcgttgtttcgtgggctatccattcctc
caggaagccaaggtcatgaaggtccaagacgagctctttagctatgaactggccgacaat
ggcaaagacattgtgactaaggatcacaacaacagggaagccgccgactgggccagggag
tctgactttcttgagaacatgcactcaaagcggttcggtatcattattggacaagttgaa
tgcctcatctatgtccacatgctgaagggtctcatcagaaccgaggagggcgcattgatc
aaggagtatgctgagaacccaagtctcaggagcacctacgctgcgcagaccattgttgac
gaggttgtcaacgaggacgagcgcttcctcgagaaggcagcattgcctatcgaggaagag
ttcccacagggcacccgggcgttcttccttggcgaatatgcctacggccgccctcttgag
gtcactgcgcataccaacaacaaagcagagattgtggtttcgatgctcaagaataaggag
cccgagttcgcaaagcagatcatccaccaggcggagcgcaacaacccttacactccttcg
ttcgctgtcgcaaagcaactgggtgttcatcctcttgtgctgagcaagataacttcgtcc
taccaggtcatcaactctggtgggttcaagttgaaccttggtctgaacttgaaatttgag
ggccgaaagcaaaaggtacttgggtactcgagaaagtcccataccggttgggaattcagc
ggcctggcgatccagcttattgccaactacatggttaccttccctgacttcttcgcggcc
atccagagggagccccaaaagagcgacgtttacgagacagacttgtggcaggaccccgcc
gttgcgtctcagaaggtcaaggaaatcgctgcttggttgaagacgcaaaagacgaaccag
tttgagcgtgttcctctggaagccgaacaacttgactcggtggtcgtccaggctctggcc
accgttggagagcagatccatgtcgcttcccaggagattgacatcaagaagctgcgtggc
gttcctcgctcggccctccttaagccgtccgacgcagagatggtgcttggcagccagaac
tttgccctgggagaccgagtcacgtatgtttctgccgctggaaaggtgcctattgccacc
cgtggaacggttgtcggcatcagcaggacggccacggctcttctactggatgtcgtctgg
gacacggctttcatgagcggaactacgctcaacgagagagctcccatgttccgtggccag
actgttgccgcttctgctgtgctgaacacgacggacaagcaggtcgtctcaaccaccagc
agatcacaacagcgacggcccgttgccacggccccggcgggcgggtaccagaatgttggc
caccctcagtacagagacgcccctgctccagcgcccctgcgtggtggatggcgaggagcc
ttgaacggtacgccctcgcgtggccgaggcaacggggctcgtggaggtggccctaacctc
gtccacagcactctggtttaccgcaacggtcctcccgatggcgcacaccagggccaggac
aacaacggacatggccatcgaggtcggggcagtgcccattcaaacgggcgaggtcgtgga
cgcggcaacctgcatggctcacccgctcccgatgcaggagagcaaaagtacggcaacgtg
ccgccgcctgccagccttgaccaaccacgaggaaggggacgtagtcgtggacgtggcgga
agaggccgtggaggccgtggaagaggcaacggaggggctgctggtaacgcaacccagggc
tag

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