Ferrigenium kumadai: FGKAn22_00980
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Entry
FGKAn22_00980 CDS
T07187
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
fku
Ferrigenium kumadai
Pathway
fku03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fku00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FGKAn22_00980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fku03400
]
FGKAn22_00980
Enzymes [BR:
fku01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
FGKAn22_00980
DNA repair and recombination proteins [BR:
fku03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
FGKAn22_00980
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
BBI98405
UniProt:
A0AAN1VYT3
LinkDB
All DBs
Position
109876..110637
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AA seq
253 aa
AA seq
DB search
MKLATWNVNSLKVRLPQVLDWLAANPVEVLCLQETKQQDADFPQADLLAAGYQSVFSGQK
TYNGVAILSRGPLDEVQFGIPGFDDEQKRVIAATINGVRVVCVYVPNGQSVDSDKYQYKL
KWLEALRAWLAGELAKYPKLALLGDYNIAPEDSDVYDPKAWEGNVLVSEPERQQFRSLLQ
LGLRDSFRLFEQAEKSYSWWDYRMMAFRRNRGLRIDHILISEALAAKCRGCIIDRTPRKL
ERPSDHTPVVAEL
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgaagctggccacctggaacgtcaattcgctgaaggtacgcctgccgcaggtgctggac
tggctcgccgccaatccggtcgaggtgctgtgcctgcaggagaccaagcagcaggatgcc
gattttccgcaggccgatctgctggcggcgggttaccaatccgtgttcagcgggcagaag
acctacaacggcgtggcgatcctgagccgcggtccgctggacgaggtgcagttcggcatt
cccggtttcgatgacgagcagaaacgcgtcatcgctgccacgatcaacggcgttcgtgtc
gtgtgcgtgtatgtgcctaacgggcaaagcgtggattccgacaagtaccagtacaagctg
aaatggctggaggcgctccgtgcctggcttgccggggagttggcgaaatatccgaaattg
gcgctgctgggcgactacaacatcgcgccggaagactccgatgtctatgatcccaaggcc
tgggaaggcaacgtgctggtgagcgagccggagcgccagcagttccgcagcctgttgcag
ctcggactgcgcgacagcttccggctgttcgagcaggcggagaaatcctattcctggtgg
gactaccgcatgatggcgttccgccgcaacagggggttgcgcatcgaccacatcctgatc
agcgaggcgctcgctgcgaagtgcaggggctgcatcatcgatcgcacaccgcgcaagctg
gagcggccttccgaccatacgcctgtggtggcggaactgtag
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