Ferrigenium kumadai: FGKAn22_01500
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Entry
FGKAn22_01500 CDS
T07187
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
fku
Ferrigenium kumadai
Pathway
fku00300
Lysine biosynthesis
fku00470
D-Amino acid metabolism
fku01100
Metabolic pathways
fku01110
Biosynthesis of secondary metabolites
fku01120
Microbial metabolism in diverse environments
fku01230
Biosynthesis of amino acids
Module
fku_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
fku00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FGKAn22_01500 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
FGKAn22_01500 (dapF)
Enzymes [BR:
fku01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
FGKAn22_01500 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
BBI98457
UniProt:
A0AAN1SXB1
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All DBs
Position
complement(170563..171393)
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AA seq
276 aa
AA seq
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MMQLKFTKMHGAGNDFVVIDGVRQKVALSPEQLRFLADRHFGVGCDQILLVEKSQHADAD
FRYRIFNADGGEVEQCGNGARCFVRFVHDHKLTPKREIVVETKSGLIKPRLEDDGRVTVN
MGAPMFAPEYIPFVGQGAVSEPLEVAGETLEISAVSMGNPHAVQIVADVEHAPVEKLGPL
IEHHPRFPNRVNAGFMQVKDRSHIRLRVYERGAGETLSCGTGACAAVVAGIRRGLLDSPV
NVVTRGGQLTIAWNGEGEPVLMTGPAISVFEGEISL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaattgaaattcaccaagatgcacggcgcaggcaacgacttcgtcgtgatcgac
ggcgtgcgccagaaggtcgcgctgtcgccggaacaactgcgcttcctcgccgaccgccat
ttcggcgtgggctgcgaccagatcctgctggtggaaaaatcgcagcatgccgatgcggac
ttccgctaccgcatcttcaacgccgacggcggcgaggtcgagcagtgcggcaacggcgcg
cgctgcttcgtgcgcttcgtgcacgaccacaagctcacgccgaagcgcgagatcgtggtg
gagaccaagagcgggctgatcaagccgcgcctcgaagacgacggtcgcgtgacggtgaac
atgggcgcgccgatgttcgcccccgagtacatcccgttcgtgggtcagggcgcggtgagc
gagccgctggaagtggcgggcgagacgctggagatcagtgcggtgtcgatgggcaacccg
cacgcggtgcagatcgtcgccgatgtcgagcatgcgccggtggaaaagctggggccgctg
atcgagcaccacccgcgcttccccaatcgcgtcaacgccggcttcatgcaggtgaaggac
cgcagccacatccgcctgcgcgtgtacgagcgcggcgccggcgagacgctgtcatgcggc
accggcgcctgcgcggcggtggtcgccggcatccgccgcggcctgctggacagcccggtg
aacgtcgtcacgcgcggcggccagttgaccatcgcctggaacggcgaaggtgagccggtg
ctgatgaccggcccggcgatctccgttttcgagggtgagataagtttatag
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