Ferrigenium kumadai: FGKAn22_05660
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Entry
FGKAn22_05660 CDS
T07187
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
fku
Ferrigenium kumadai
Brite
KEGG Orthology (KO) [BR:
fku00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fku03400
]
FGKAn22_05660
Enzymes [BR:
fku01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FGKAn22_05660
DNA repair and recombination proteins [BR:
fku03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
FGKAn22_05660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
DEAD
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
BBI98873
UniProt:
A0AAN1SXS1
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All DBs
Position
608044..611310
Genome browser
AA seq
1088 aa
AA seq
DB search
MTNHIALDPRRSIVVEACAGSGKTWLLVSRIVRLLLDGAQPSQILAITFTRKAAQEMQAR
LQLWLRDLAMGDEDFVRKFFAERGVENLSDAQLQRARSLYSSVLLAQPGITISTFHGWFM
QVMQRAPLNANVMQGMSLLERAGSEQEEAWEEMLEQMRKQPEGAEAQHMQWLFEDCGLFT
TRKLLFNFLGKRAEWWAYTQGQDDALSFALDNLRADLAVDMEFDPVADWGMCGNTEELLF
AFIRQLVDNGTDAQKNKASEMERAWTDSAPESRFGRLWPLLFTQKNEPRVGKPIAPTKKQ
NETDFLATLATLQDSLQEVRYTLAEQQAYRLNEAVLHCGVAFLERYQALKTQKQQMDFSD
LEWQLCRLLQQSEHAETMQYKLDSRYRHVLLDEFQDTNPLQWQILRAWFDAAVAVDSQPT
VFVVGDPKQSIYRFRRADARLFGVAREYLQEHFAAEMLGNSMTRRNSQPVVDVVNAVFRS
QPDGFEFVEHQTHQRDLPGHVAVLPLAIAESSKEEEAGDAPLALRDPLTTPREEIEEGAR
HREAGQLAELLKTIVSDWSVSEGGEERRATYGDIMVLVRSRTHLAIYEEALRAKHIPFIS
SRRGGLLDTLEAEDVQALLMFLITPFADLSLAQVLRAPVFACSDADLMQLSVYRIRDTVG
AEGSPESCIPYPVSPSWWSRLQHLADPSPALQRAAELLQRWLALADKLPVHDLLDRIYFE
GDVLARYTAVLPPEMRAKVVANLHALMEIALSVDAGRYPSLPRFLQELRELRDSTDDSPD
EGKLGTAGDAVRIYTVHESKGLEAPIVWLLDTNVEKKNKEGNDVLLDWPTHEPQPLHFSL
YADQASRGRKRVPLFEQDAAQQAREEMNLLYVAMTRAQQALIVSGNKGSKENKSMTWYDR
IAAVVSEQPNPLHKAVSVSETKTQRGEKTVALPAVVSTGKRAARNTVQQQRGIWLHALLQ
HLTEGAADGGELRRRLGISAAEMESLWQQAQQLLAAPQLLRFFDAQQHRSACNEMPYINA
QGELKRIDRLVEFDDEVWVLDYKLGDSEDASRYRAQMQEYRAAMQSVYSGKTVRCALVFA
DGVLSEVV
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaccatatcgccctcgaccccaggcgcagcatcgtcgtagaggcttgcgcgggc
agcggaaagacttggctgctggtatcgcgcatagtccgcttgctgctggacggtgcgcag
ccttcgcagatccttgccatcaccttcacgcgcaaggcggcgcaggagatgcaggcgcgt
ttgcaactctggctgcgcgacctggcgatgggcgacgaagatttcgtacgcaagttcttc
gccgaacgcggcgtggaaaacctgagcgatgcgcaactgcaacgcgcccgcagcctgtac
agcagcgtgctgctcgcgcagcccggcatcaccatcagcaccttccacggctggttcatg
caggtcatgcagcgcgcgccgctgaacgccaacgtgatgcagggaatgtcattgctggag
cgcgcaggcagcgagcaggaagaggcctgggaagagatgctggagcagatgcgcaagcag
cctgagggggctgaagcgcagcacatgcaatggctgttcgaagattgtggcctgttcacc
acgcgcaagctgctattcaacttcctcggcaagcgcgcggagtggtgggcttacacccaa
ggacaggatgatgcgctgagcttcgcgctggacaacctgcgcgccgacctcgccgtggac
atggagttcgatccggtcgcggattggggtatgtgcggcaacaccgaggagttgttgttc
gccttcatacggcagctggtggacaacggtactgatgctcagaagaacaaagcgagtgag
atggaacgcgcctggaccgactcggcgcctgaatcacgatttggaaggctatggccgtta
ttgttcactcagaaaaacgagccgagagttggcaagccgattgcgcctaccaagaagcag
aacgagacagatttccttgctaccctggcaacgttgcaggacagcttgcaggaggttcgc
tacacactcgccgaacagcaagcctaccgcctgaacgaagcggtgctgcattgcggcgtc
gcgttcctggagcgttatcaggcattgaagacgcaaaagcagcagatggatttctccgac
ctggaatggcagctgtgccggttgctgcagcagagcgaacacgccgagaccatgcagtac
aagctcgacagtcgataccgccatgtactgctggacgagttccaggacaccaatccgctg
caatggcaaatattgcgagcatggttcgatgcggcagtggcggtggactcgcagcccacc
gtgttcgtcgtcggcgaccccaaacaatccatctaccgttttcgccgtgcagatgcgcgg
ctgttcggtgtggcgcgcgaatatctgcaagagcattttgccgccgagatgctaggcaac
agcatgacgcgccgaaactcgcagcctgtcgtcgatgtggtgaatgccgtgttccgctcg
cagccggacggcttcgaattcgtcgagcaccagacgcatcagcgggacttgccaggtcac
gtggcggtgttgccgctggcaatcgccgaatcgagcaaggaagaagaggcaggggacgcg
ccgctagccttgcgcgacccgctgaccacgccgagagaggaaattgaggaaggtgcgcgc
cacagagaggccgggcaattagccgagctgctgaaaaccatcgtcagcgactggtcggtc
agtgagggcggcgaagagcgccgcgcgacctacggcgacatcatggtgctggtgcgcagc
cgcactcacctcgcaatttacgaagaagccttgcgcgcgaagcacatccccttcatcagt
tcgcggcgcggcggcctgctcgatacgctggaagcggaggacgtgcaggcgctattgatg
ttcctcatcactcccttcgccgatctctctctcgcacaggtgctgcgcgcaccggtcttc
gcgtgcagcgacgcggacctgatgcagctatcggtatacaggatacgggatacagtgggg
gcagagggttctcctgaatcctgtatcccgtatcccgtatccccgtcatggtggtcacgc
ctgcagcatctcgccgacccgtcgcccgcattgcaacgtgccgccgaactgctgcaacgc
tggctcgcgctcgccgacaagcttccggtacacgacctgctcgaccgcatctatttcgag
ggcgacgtgctggcgcgctacaccgccgtgctgccacccgagatgcgcgccaaggtcgtc
gccaacctgcacgccttaatggagatcgcgctctccgtggatgccgggcgttatcccagc
ctgccgcgcttcctgcaggaactgcgtgaattgcgcgacagcacggacgactcgccggac
gaaggcaagctgggcacggcgggcgatgccgtgcgcatctacaccgttcacgaatcgaaa
gggctggaagcccccatcgtctggctgctggatacgaatgtcgaaaagaagaacaaggaa
ggcaacgacgtgctgctcgactggcctacccacgagccgcagccgctgcacttctccctg
tatgccgatcaggcctcgcgcggcaggaagcgcgtgccgctgttcgagcaggatgccgcc
cagcaggcacgcgaggagatgaacctgctctacgtcgctatgacccgcgcccaacaggcg
ttgatcgtcagcggcaacaagggaagtaaagaaaacaaatcgatgacatggtacgaccgc
atcgcggcagtggtgagcgaacagccgaatccgttgcacaaggcagtgtccgtctcggaa
acgaagacacagcgtggtgaaaagacagtggcgttgccggccgtcgtctccaccggcaaa
cgcgcggcccgcaacaccgtgcaacagcagcgcggcatctggctgcacgcattgctgcag
cacctgaccgagggcgcggcggacgggggcgaactccggcgacgcctcggcatttccgcc
gccgagatggaatccctctggcaacaggcacagcagctgcttgctgcgccccagctctta
cgcttcttcgatgcgcaacaacaccgcagcgcctgtaacgagatgccctatatcaacgcg
cagggcgagctgaaacggatcgaccgtctggtggaattcgatgacgaagtgtgggtgctc
gattacaagctgggtgatagcgaagacgcatcgcgttaccgcgcacagatgcaggaatac
cgggcggcgatgcaatcggtgtattcgggcaagacggtgcgctgtgcgctggtgtttgcg
gatggcgtgctgagcgaggtagtgtaa
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integrated database retrieval system
