Ferrigenium kumadai: FGKAn22_09300
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Entry
FGKAn22_09300 CDS
T07187
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
fku
Ferrigenium kumadai
Pathway
fku03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fku00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FGKAn22_09300 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fku03019
]
FGKAn22_09300 (recQ)
03400 DNA repair and recombination proteins [BR:
fku03400
]
FGKAn22_09300 (recQ)
Enzymes [BR:
fku01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FGKAn22_09300 (recQ)
Messenger RNA biogenesis [BR:
fku03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FGKAn22_09300 (recQ)
DNA repair and recombination proteins [BR:
fku03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FGKAn22_09300 (recQ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
ResIII
Peripla_BP_4
IF2_N
Motif
Other DBs
NCBI-ProteinID:
BBI99237
UniProt:
A0AAN1SYC5
LinkDB
All DBs
Position
989610..991448
Genome browser
AA seq
612 aa
AA seq
DB search
MATSSPQQILHDVFGYASFRGAQQAIVEHVISGGDALVLMPTGGGKSLCYQIPALLRDGV
GIVVSPLIALMQDQVDALKQLGVSAAFLNSSLDADAAREVYRQIHRGELKLLYVAPERLM
TEGFLNLLEGLQQESRIALFAIDEAHCVSQWGHDFRPEYRALTVLHERFPEVPRIALTAT
ADAPTRREIVERLALEQAQQFVSSFDRPNIRYRVTQKNNARQQLQSFLETEHPDDAGIVY
CLSRKKVEETAAWLKEQGWDALPYHAGLDAVTRNRNQQRFLREEGVIMVATVAFGMGIDK
PNVRFVAHLDLPKSMEGYYQETGRAGRDGLPANAWMAYGLGDVVSMRQMLLSGDAPEERK
RVELQKLDALLGFCESTECRHQTILRYFGEEHPGDCGQCDNCLEPVDTWDATQAAQMALS
CVYRTGQRFGVAHLIDVLLGKVTPKVEQFNHQQLSTFGIGNSLAQAQWSSVYRQLVAAGL
LNVDMEAYGGLRLTEAARPVLRGEQEVWLRRDADPVKRKAQRTERSAKSREPFAGANDDP
LWLALKAKRTELAREQGVPPYVIFHDSTLLEILNHRPQTLDEMGKISGVGQAKLAKYGDE
FLQVVEDVANGV
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
gtggcaacttcctctccacaacaaatcctccatgacgttttcggctacgcatcgtttcgc
ggtgcgcagcaggccatcgtcgagcatgtaataagcggcggcgacgcgctggtgctgatg
cccaccggcggcggcaagtcgctgtgctaccagatcccagccttgctgcgcgatggcgtc
ggcatcgtggtatcgccgctgatcgcgctgatgcaggaccaggtcgatgcgctcaagcag
ctcggcgtgtcggcggccttcctcaactccagcctggatgccgatgccgcgcgagaggtg
tatcggcagattcatcgcggcgagctgaagctgctgtatgtcgcgccggaacggctgatg
accgaaggttttctgaatctgctggagggcttgcagcaggagagccgcatcgcgttgttt
gccatcgatgaggcgcattgcgtgtcacagtgggggcacgacttccgccccgagtaccgc
gcgctgacggtgctgcacgagcgctttcccgaggtgccgcgcatcgcgctcacggctacg
gcggacgcgccgacgcggcgcgagatcgtcgagcggctggcgctggagcaggcgcagcag
ttcgtctccagcttcgaccgccccaacatccgctaccgcgtgacccagaagaacaatgcg
cgccagcagttgcagtccttcctcgaaaccgagcatcccgacgacgcgggcatcgtgtat
tgcctgtcgcgcaagaaggtcgaggagaccgccgcctggctcaaggagcagggttgggat
gccttgccgtatcacgccgggctggatgccgtcacgcgcaacaggaaccagcagcgattc
ctgcgcgaggagggcgtcatcatggtcgccaccgtcgccttcggcatgggcatcgacaag
cccaacgtgcgcttcgtcgcccacctcgatctgcccaagagcatggaaggctactatcag
gagactggccgtgccggtcgtgatgggttgcccgcgaatgcgtggatggcttacggtctg
ggcgatgtggtgtccatgcgacagatgctgctctccggtgacgcgccggaggagcgcaag
cgcgtcgaactgcaaaagctcgatgcgctgctcggtttctgcgaatccaccgagtgccgc
caccagaccatcctgcgctacttcggcgaggaacatcccggcgattgcgggcagtgcgac
aactgcctcgaaccggtggacacatgggacgctacgcaagccgcgcagatggcgctgtcc
tgcgtctatcgcaccggtcagcgcttcggtgtcgcgcacctgatcgacgtgctgctgggc
aaagtgactcccaaagtcgagcaattcaaccaccagcaactcagtaccttcggcataggc
aattcactggcgcaggcgcagtggagcagcgtctatcgccagctcgtcgccgccggactc
ctcaacgtggacatggaagcctacggcggcctgcgcctcaccgaagctgcgcgtcccgtg
ctgcgcggcgaacaggaagtctggctgcgccgcgacgccgatcccgtcaagcgcaaagcc
cagcgaaccgaacgtagcgccaaatcgcgcgaacctttcgccggagcgaacgacgatccc
ctgtggctcgccctcaaagccaaacgcacagagctcgcccgcgaacaaggcgttccgccc
tacgtcatcttccacgacagcaccttgctggagatcctcaatcaccgtccgcagacgctg
gacgagatggggaagatcagcggagtggggcaggccaagctggcgaagtatggcgatgag
tttctgcaggtggtggaagacgtggcgaatggtgtttga
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