Ferrigenium kumadai: FGKAn22_10560
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Entry
FGKAn22_10560 CDS
T07187
Symbol
nifA
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02584
Nif-specific regulatory protein
Organism
fku
Ferrigenium kumadai
Pathway
fku02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
fku00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FGKAn22_10560 (nifA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fku03000
]
FGKAn22_10560 (nifA)
Transcription factors [BR:
fku03000
]
Prokaryotic type
Helix-turn-helix
Other families
FGKAn22_10560 (nifA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
GAF_2
HTH_8
AAA_5
GAF_3
AAA_2
AAA
Mg_chelatase
AAA_7
AAA_3
Kinesin
HTH_23
AAA_16
Parvo_NS1
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
BBI99363
LinkDB
All DBs
Position
complement(1123748..1125313)
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AA seq
521 aa
AA seq
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MVEHDTNALREGWSELELEMLRTELETLYQVSRVLSRSLDFKQTLDGVLHALHDGVGLER
GMVSLMDAESGELQVSLVYGVSDTITEEVSYLPGEGVVGSILKTGNSIAVERIMDEPRFL
SRLGIYNPMGAFVGVPIRVGKKVVGVLAAQPAPGAEILLNEYERFLEMVANLIGQSVRLS
QDVAQEKRELTEERDVLRRTVRGQYGFDNIIGHTQSMRRIFEQVRLVAKWNTTVLIRGET
GTGKELIANAIHYNSPRARGNYVKLNCAALPETLLESELFGHEKGAFTGAVAQRKGRFEQ
AEGGTVFLDEIGEISASFQAKLLRVLQEGELERVGGTQTIKVDVRVVAATHRDLEAEVEA
GRFREDLYYRLNVMPLYLPPLRERMEDIPEIARFLVEKVGTGQGRQLGLTDTALRVLMHH
DWPGNVRELENCLERAAVMTEGDTIDRDAILLTGIDEKISASRGAIQTLDLDDPNLDERE
RVIAALEQAGWVQAKAARLLDMTPRQIAYRIQTLNIKVKQI
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggttgagcacgataccaacgcactgcgcgaaggctggtccgagctcgaactcgagatg
ctgcgcaccgagctggagacgctgtaccaggtgagccgcgtgctgtcgcgctcgctcgat
ttcaagcagacgctggacggcgtgctgcacgcgctgcacgacggcgtcgggctggagcgc
ggcatggtcagcctgatggacgcggagagcggagagcttcaggtgtcactggtgtacggc
gtgtccgataccatcaccgaggaggtcagctatctgcccggcgagggcgtggtcggctcc
atcctgaagaccggcaacagcatcgcggtggagcgcatcatggacgagccgcgcttcctc
tcccgcctcggcatctacaacccgatgggcgccttcgtcggcgtgccgatccgcgtcggc
aagaaggtggtgggcgtgctcgcggcgcagccggcgccaggcgcggagatactgctcaac
gaatacgagcgcttcctggagatggtcgccaacctgatcggccagagcgttcgtctgtcg
caggacgtggcgcaggagaagcgcgaactgaccgaggagcgcgacgtgctgcgccgcacc
gtgcgcgggcagtacggcttcgacaacatcatcggtcatacccagtcgatgcgccgcatc
ttcgagcaggttcggctggtggcgaagtggaacaccaccgtgctgatccgcggcgagacc
ggcaccggcaaggagctgatcgccaacgccatccattacaactcgccgcgcgcgcgaggc
aactacgtcaagctcaactgcgcggcgctgcccgagaccctactggaaagcgaactgttc
ggccacgagaaaggtgcgttcaccggcgcggtggcgcagcgcaagggacgcttcgagcag
gccgagggtggcacggtgttcctcgacgagatcggcgagatctccgcctcgttccaggcc
aagctgctgcgcgtgctgcaggagggcgagctggaacgcgtcggcggcacgcagaccatc
aaggtcgacgtgcgcgtggtcgccgccacccaccgcgacctggaggccgaggtcgaagcc
ggccgcttccgcgaggacttgtactaccgcctcaacgtcatgccgctttacctgccgccg
ctgcgcgagcgcatggaagatatcccggaaatcgcgcgcttcctggtggagaaggtcggc
acggggcaaggccgccagctcggtcttaccgacaccgcgctgcgcgtgctgatgcaccac
gactggccgggcaacgtgcgcgagctggagaactgcctggagcgcgccgcagtgatgacc
gaaggcgacaccatagaccgcgacgccatcctgctcaccggcatcgacgaaaagatatcg
gcgagccggggcgcgatccagacgctggacctcgacgaccccaacctcgacgaacgcgaa
cgcgtcatcgccgcgctggaacaagccggctgggtgcaggccaaggccgcgcgcctgctc
gacatgaccccgcgccagatcgcctaccgcatccagacgctgaacatcaaggtgaaacag
atttga
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