Ferrigenium kumadai: FGKAn22_13010
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Entry
FGKAn22_13010 CDS
T07187
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
fku
Ferrigenium kumadai
Pathway
fku03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fku00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FGKAn22_13010 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fku03019
]
FGKAn22_13010 (pnp)
03016 Transfer RNA biogenesis [BR:
fku03016
]
FGKAn22_13010 (pnp)
Enzymes [BR:
fku01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
FGKAn22_13010 (pnp)
Messenger RNA biogenesis [BR:
fku03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FGKAn22_13010 (pnp)
Transfer RNA biogenesis [BR:
fku03016
]
Prokaryotic type
tRNA degradation factors
FGKAn22_13010 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH_2
OB_RRP5_4th
HrcA
DNA_pol3_a_NI
KH_KhpA-B
CRS1_YhbY
Motif
Other DBs
NCBI-ProteinID:
BBI99608
UniProt:
A0AAN1SZ13
LinkDB
All DBs
Position
complement(1390956..1393067)
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AA seq
703 aa
AA seq
DB search
MSHYKKTLAYGNHQLTLETGEIARQASGAVMVSLDDTVVLVTVVGRKDAKPEQDFFPLTV
DYQEKTYAAGKIPGGFFKREGRPSEKEILTSRLIDRPLRPLFPESFYNEVQIVATVMSSD
PEIDSDIPAMIGASAALALSGIPFDGPIGAARVGYVDGKYLLNPTATELKTSQMDLVVAG
TDRAVLMVESEAQQLSEEVMLGAVVYGHEQMQAVINAINEMADAVGAPAWDWVAPAKNEA
LIAKINALAESELKAAYAIRSKQARTDAVNAIRAKVSEVLATPEFESVSKNEIGELFSAL
EARIVRGQILGGEPRIDGRDTRTVRPITIRNGVLPRVHGSSLFTRGETQAIVVATLGSMR
DAQVIDALQGEYTDRFMLHYNFPPYSTGETGRVGSPKRREIGHGRLAKRALVAVLPSEED
FGYAVRVVSEITESNGSSSMASVCGGCLSLLDAGVPLKAHVAGIAMGLIKEGNRFAVLTD
ILGDEDHLGDMDFKVAGSETGVTALQMDIKINGITKEIMQAALTQAREGRMHILGLMKQA
MPDARTEVSEFAPRMIKMKINPEKIRDVIGKGGSVIRALTEETGTTIDIDDDGNITIACV
SGEAGNLAKQRIEDIVAEVEVGKVYEGPVVKLLDFGALVNVLPGKDGLLHISQIAHERVN
AVSDHLKEGQVVKVKVLEVDDKGRMKLSMKALLPAPEKAPVAE
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
ttgagtcactataaaaaaacactagcgtacggcaatcatcaactcactctggagaccggc
gagatcgcccgtcaggccagcggcgcagtgatggtcagcctggacgacaccgtggtgctg
gtcaccgtggtggggcgcaaggatgcgaagccggagcaggactttttccccctgaccgtt
gactatcaggaaaagacctatgccgcgggcaagatccccggcggcttcttcaagcgcgaa
ggccgtccgagcgaaaaggagatcctgaccagccgcctgatcgaccgtccgctgcgtccg
ctgttcccggaaagcttctacaacgaagtgcagatcgtcgcgactgtgatgtcttccgat
cccgagatcgactccgacatcccggcaatgatcggcgcatccgcagcgctggcgctgtcc
ggcatcccgttcgacggcccgatcggcgcggcacgcgtcggttatgttgacggcaagtat
ctgctgaacccgactgcgactgaactgaagacttcgcagatggatctggtcgtcgccggc
accgaccgtgccgtgctgatggtggaatccgaggcacagcaactatccgaggaagtgatg
ctgggcgccgtggtgtacggccacgaacagatgcaggccgtgatcaacgcgatcaacgag
atggccgatgcggtcggcgcgccggcatgggactgggttgctcccgccaagaacgaggcg
ctgatcgccaagatcaatgcgctggccgagagcgaactgaaggccgcttatgcgatccgc
tccaagcaggcgcgcaccgacgcggtcaacgccattcgcgccaaggtgtccgaggtattg
gcgacgccggaattcgagagcgtctccaagaacgagatcggcgaactgttcagcgcgctg
gaagcccggattgtccgcgggcagatcctgggcggcgagccgcgcatcgacggccgcgac
acccgcaccgtgcgcccgatcaccatccgcaacggcgtgctgccgcgcgtccacggctct
tcgctgttcacccgcggtgagacacaggccatcgtggttgccacgctgggcagcatgcgc
gatgcgcaggtcatcgacgcgctgcaaggcgaatataccgaccgcttcatgctgcactac
aacttcccgccgtattccaccggtgagaccggccgcgtgggttcgcccaagcgccgcgag
atcggccacggccgtctcgccaagcgcgcgctggtggcagtgctgccaagcgaagaagat
tttggctacgcggtccgcgtggtgtccgagatcaccgaatcgaacggctccagctccatg
gcttcggtctgcggcggctgtctgtcgctgctggatgcgggcgtgccgctgaaggcgcat
gtcgccggcatcgcgatgggcctgatcaaggaaggcaaccgtttcgcggtgctgaccgac
atcctcggcgacgaggatcatctgggcgacatggacttcaaggtggccggtagcgaaacc
ggcgtgaccgcgttgcagatggacatcaagatcaacggcatcaccaaggagatcatgcag
gctgcgctgacccaggcgcgcgaaggccgcatgcacatcctcggcctgatgaagcaggcg
atgccggatgctcgcactgaggtttccgaatttgcgccgcgcatgatcaagatgaagatc
aatcccgagaagatccgcgacgtgatcggcaagggcggatcggtgatccgtgcgctgacc
gaagagacgggcacgaccatcgacatcgacgacgacggcaatatcaccatcgcctgcgtc
agcggcgaggcgggtaacttggccaaacagcgtatcgaagacatcgtggccgaagtggaa
gtcggcaaggtctacgaaggtccggtggtcaagctgctcgacttcggtgccttggtcaac
gtgctgccgggcaaggatggtctgctgcatatctcccagatcgcccacgaacgcgtcaat
gccgtgtccgaccacctcaaggaaggccaggtcgtcaaggtcaaggtgctggaagtggac
gacaagggccgcatgaagttgagcatgaaggcgctgctgcccgcgcctgaaaaggctccc
gtggccgagtaa
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