Ferrigenium kumadai: FGKAn22_13030
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Entry
FGKAn22_13030 CDS
T07187
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
fku
Ferrigenium kumadai
Brite
KEGG Orthology (KO) [BR:
fku00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fku03016
]
FGKAn22_13030 (truB)
Enzymes [BR:
fku01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FGKAn22_13030 (truB)
Transfer RNA biogenesis [BR:
fku03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FGKAn22_13030 (truB)
Prokaryotic type
FGKAn22_13030 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
DUF5702
Motif
Other DBs
NCBI-ProteinID:
BBI99610
UniProt:
A0AAN1SYV5
LinkDB
All DBs
Position
complement(1393489..1394430)
Genome browser
AA seq
313 aa
AA seq
DB search
MARNFRPLDGVLLFDKPLELSSNTALQKVRRLFQSEKAGHTGTLDPLATGLLPVCFGEAT
KFSTALLDADKTYRATLRLGQTTTTGDAEGEIVTERPVNVVQADVDAVLERFRGTILQLP
PMHSALKHQGKPLYEYIRRGETIEREPREVVIHELVLDRFVANEMDITVRCSKGTYVRTL
AEDIGEALGCGAHLIALRRTAIAHFYLKDACDMAQLEAMTMEQREAHVLPVDSLMPGMPQ
LQLDAVQVKRLAQGQRLALDAGLPDGKVSLHGPQGFAGVGVLQGRRLAPDRLLSSVAKQA
AKINLAENYGVEQ
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtaatttccgcccgctggatggcgtgctgttgttcgacaaaccgctggaactg
agctccaacaccgcactccagaaagttcgccgcctgttccagtccgagaaggccggccat
accggcacgcttgatccgcttgccaccggtctgttgccggtctgtttcggcgaggcgacc
aagttttccaccgctttgctcgatgccgacaagacttatcgcgcgacgctgcgcctgggg
cagaccacgaccaccggcgatgcggaaggcgagatcgttaccgaacgtcctgtcaatgtt
gttcaggccgatgtggatgccgtgctggagagattccggggcactatcctgcagcttccc
cccatgcatagcgcactcaagcatcagggcaagccgctctacgaatacatccgcaggggc
gagaccatagagcgcgagccgcgcgaggtagtgatccacgagctggtgctggaccgcttc
gtcgcgaacgagatggacatcaccgtgcgctgcagcaagggaacttacgtgcgcacgctg
gccgaggacatcggcgaggcgctcggttgcggcgcgcacctgatcgccttgcgccgcacc
gctatcgcccatttctacctgaaagacgcctgcgacatggcgcaactggaggcgatgacc
atggagcagcgcgaggcccatgtgctgccggtggacagcctgatgccgggtatgccccag
ctgcagttggatgccgtgcaggtcaagcgtctggcgcaggggcagcggctggccctggat
gccggattgcccgacggcaaggtcagtctgcacggcccgcagggctttgccggggtcggg
gtgctgcaaggccgtcgcctagctcccgaccggttgttatccagtgtggcaaaacaggcc
gccaagattaatttggcggaaaattatggggttgagcaatag
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