Ferrigenium kumadai: FGKAn22_19670
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Entry
FGKAn22_19670 CDS
T07187
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
fku
Ferrigenium kumadai
Pathway
fku00300
Lysine biosynthesis
fku00470
D-Amino acid metabolism
fku01100
Metabolic pathways
fku01110
Biosynthesis of secondary metabolites
fku01120
Microbial metabolism in diverse environments
fku01230
Biosynthesis of amino acids
Module
fku_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
fku00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FGKAn22_19670 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
FGKAn22_19670 (lysA)
Enzymes [BR:
fku01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
FGKAn22_19670 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
BBJ00275
UniProt:
A0AAN1T216
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All DBs
Position
complement(2085138..2086385)
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AA seq
415 aa
AA seq
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MSSHFQYREGALCVEQVPLADIAAQFGTPCYVYSRAALTDGYRQFSNALQGREHLICYAV
KANSNLAILNVFARLGAGFDIVSGGELQRVLAAGGDAGKVVFSGVGKSVAEMRLALDAGI
LCFNVESAAELERLNEVAGSMGKVAPISLRVNPDVDAKTHPYISTGLKQNKFGVAYTEAV
ALYRKAATLPHLRITGVDCHIGSQLTETSPFIAAVEKVLALVDALAREGIRLEHIDLGGG
LGIRYNDETPPAIADYVAALLGALAGRSEKLVLEPGRVLVGNAGALLTRVEYLKPGEEKN
FAIVDAAMNDLMRPALYDAYHNILPVQRENHVSQSYEVVGPICETGDFIGHARELAIAPQ
SLLAVLSAGAYGMSMSSNYNTRPRAAEVMVDGASVHLVRERETVPQLFAGEKIIS
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtcattttcaatatcgcgaaggcgcgctgtgcgtcgagcaagtgcccttggcc
gacatcgccgcgcagttcggcactccctgttatgtatattcgcgcgccgcgttgactgac
ggctaccgacaattcagcaacgcgctgcaaggccgggaacatctgatctgctatgcggtg
aaggcgaattccaacctggcgatcctgaacgtgttcgctcgcctgggggcgggcttcgat
atcgtttccggcggcgagctgcagcgcgtgctcgcggctggcggtgatgcgggcaaggtg
gtgttctccggcgtgggcaagagcgtcgccgagatgcgcctggcactggatgcgggcatc
ctgtgtttcaacgtcgagtctgccgccgagctggaacggctgaacgaggtggccggcagc
atgggcaaggtcgcgccgatcagcctgcgcgtgaatcccgacgtggatgcgaagacccat
ccctacatctccaccggcctcaagcagaacaagttcggtgtggcctacaccgaagccgtc
gctttgtaccgcaaggcagcgacgctgccgcatctgcgcattaccggcgtggactgtcac
atcggatcgcagctcaccgagaccagcccgttcatcgccgcggtggaaaaggtgctggcg
ctggtcgatgcgctggcgcgcgaaggcattcgtctcgaacacatcgatctgggcggcggc
ctgggtatccgttacaacgacgagacgccgccggcaatcgcggactatgtggctgcgttg
ctgggcgcacttgccggacgtagcgagaagctggtgctcgagccggggcgcgtgctggtt
ggaaacgccggcgcgctgctgacgcgcgtcgaatatctcaagcccggcgaggagaaaaat
ttcgccatcgtcgatgcggcgatgaacgatctgatgcgtcccgctttgtacgatgcgtac
cacaacatcctgccggtgcagcgcgaaaaccatgtatcgcagagctatgaagtggtcggc
ccgatctgcgaaacgggcgacttcatcggccatgcgcgcgaactggcgatcgccccgcaa
tccttgctggctgtgctttccgcgggcgcatacgggatgagcatgagctccaattacaac
acccgtccgcgtgccgccgaggtgatggtggacggtgcatcggtgcatctggtgcgcgag
cgggagaccgtgccacagttgtttgcgggcgaaaaaataatctcgtga
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