Ferrigenium kumadai: FGKAn22_21030
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Entry
FGKAn22_21030 CDS
T07187
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
fku
Ferrigenium kumadai
Brite
KEGG Orthology (KO) [BR:
fku00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fku03016
]
FGKAn22_21030
Enzymes [BR:
fku01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
FGKAn22_21030
Transfer RNA biogenesis [BR:
fku03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
FGKAn22_21030
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
GGDEF_2
DUF3261
Motif
Other DBs
NCBI-ProteinID:
BBJ00411
UniProt:
A0AAN1T1N7
LinkDB
All DBs
Position
complement(2232733..2233281)
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AA seq
182 aa
AA seq
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MSDKPDSTARVFFALWPNAAERAALAGWQPPLRELCGGRAMLAANLHNTLVFIGNIAEHR
LEALKLAAQEVEAERFKLRFDLARYWGHNHIVFAAPHSAPPQLAQLVHDLEQHLERHRFR
FDRRDYKPHITLLRHAKWSDSPLPEMPAVPWPVHDFVLVQSPQQEGDSHYRVLARFPLTP
RP
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgagcgataagcctgattccactgcccgagtgtttttcgcgctctggccgaatgccgcg
gaacgcgccgccctggccggatggcagccgccgctgcgcgagctgtgcgggggacgagcg
atgctggcggccaatctgcacaacacgctggtgttcatcggcaacattgccgagcaccgc
ctcgaggcactgaagctggcggcgcaggaagtcgaggcggagcgattcaagctgcgcttc
gatctggcgcgctactgggggcacaaccacatcgtgttcgccgcgccgcacagcgcaccg
ccgcaactggcacagctggtgcacgatctggagcagcacctggagcgccatcgtttccga
ttcgaccggcgcgattacaaaccgcacatcacgctgctgcgccatgccaagtggagcgat
tcgcctttgcctgagatgccggcggttccctggccggtgcacgacttcgtgctggtgcag
tcccctcaacaggagggcgattcgcactatcgcgtgctggccagattccccttgacgcca
aggccatag
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