Ferrigenium kumadai: FGKAn22_22710
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Entry
FGKAn22_22710 CDS
T07187
Symbol
uvrD
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fku
Ferrigenium kumadai
Pathway
fku03420
Nucleotide excision repair
fku03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fku00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FGKAn22_22710 (uvrD)
03430 Mismatch repair
FGKAn22_22710 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fku03400
]
FGKAn22_22710 (uvrD)
Enzymes [BR:
fku01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FGKAn22_22710 (uvrD)
DNA repair and recombination proteins [BR:
fku03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FGKAn22_22710 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
FGKAn22_22710 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_12
Viral_helicase1
AAA_11
DUF3553
Motif
Other DBs
NCBI-ProteinID:
BBJ00579
UniProt:
A0AAN1W0L0
LinkDB
All DBs
Position
complement(2402754..2404928)
Genome browser
AA seq
724 aa
AA seq
DB search
MNSHLLSGLNPEQRAAVELPAQSALILAGAGSGKTRVLTTRIAYLISTGQVSPHGILAVT
FTNKAAKEMVTRLSAMLPINTRGMWIGTFHGLCNRMLRAHFREANLPQTFQILDSGDQLS
AIKRVMKALNVDDEKYPPREMQWFISGSKEQGLRAHEVEAYDPYTKRKVEVFAEYDAQCQ
REGVVDFSELLLRCYELLSRNTQLREHYQERFKHILVDEFQDTNPLQYRWLKLLAGKENA
LFAVGDDDQSIYAFRGANVGNMQELLRDFHVESVIKLEQNYRSHGNILEAANALIEHNRN
RLGKNLWTSESGGEKLRVYEAPTDVDEAAFIVEEIQQLKREGVNLTEMALLYRSNAQSRV
LEHALVSAGLSYRVYGGLRFFERQEIKHALAYLRLMENTDDDNALLRIINFPTRGIGARS
LEQLQETARMNGTTLWDAAARAGGKVSAFVALIESLRSATKDLPLPEIMDHVLEHSGLVA
HYESEKTSASKKREAEERLENLNELVNAATLFVHENEDDSLTAFLTHASLEAGEHQAGDS
EDALHLMTVHAAKGLEFHTVFITGLEEGLFPHQNSQNVDGGLDEERRLMYVAITRARRRL
YLTFAQSRMLHGKVNYGMASSFLRELPEELLLWLTPRVSARRTFGNSSYETSSYVAAFGG
ASAEPAPPPPGALWKMGQRVFHQKFGEGTVTGIEGGGADARVQVNFKHAGSKWLALEYAK
LTAV
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgaattcccatctgctttccggtctcaatcccgaacaacgtgccgccgtcgaacttccc
gcccaatccgcgctgatccttgcgggggcgggcagcggcaagacgcgcgtgctgaccacg
cgcatcgcctatctcatcagcaccgggcaggtcagcccccacggcatcctcgctgtgact
ttcaccaacaaggcggcgaaggagatggtgacgcgattgtcggcgatgctgccgatcaac
acgcgcggcatgtggatcggcactttccacgggctgtgcaaccgcatgctgcgcgcgcat
tttcgcgaggcgaacctgccgcagacgttccagatcctcgattcgggcgaccagctctcc
gccatcaagcgcgtgatgaaggcgctcaacgtcgacgacgaaaagtatccgccgcgcgag
atgcagtggttcatcagcggcagcaaggagcaggggctgcgcgcgcacgaggtggaggcc
tacgatccctataccaagcgcaaggtggaagtgttcgccgagtacgacgcgcagtgccag
cgcgagggtgtggtggatttctcggagctgctgttgcgctgctacgagctgctgtcgcgc
aatacgcagctgcgcgagcattaccaggagcgcttcaagcacatcctggtggatgagttc
caggataccaatcctttgcaataccgctggctgaaactcctggcaggcaaggaaaatgcg
ctgttcgcggtgggcgatgacgaccagtcgatctacgctttccgcggcgcgaacgtgggc
aacatgcaggagctgctgcgcgacttccacgtcgagagcgtcatcaagctggagcagaac
taccggtcgcacggaaacatcctcgaggcggcgaacgcgctgatcgagcacaaccgcaac
cgcctcggcaagaatctgtggacctcggaaagcggcggcgagaagctgcgcgtgtacgag
gctccgacggatgtggacgaggccgctttcatcgtcgaggagatccagcagctcaaacgc
gagggcgtgaacctcaccgagatggcgctgctgtaccgctccaacgcgcagtcgcgcgtg
ctggaacatgcgctggtgtcggcggggctgtcgtaccgcgtatacggcggactgcgcttc
ttcgagcggcaggagatcaagcacgcgctggcctacctgcgcctgatggagaacaccgac
gacgacaatgcgctgctgcgcatcatcaacttccccacgcgcggcatcggcgcacgcagc
ctcgagcagttgcaggaaacggccaggatgaacggcaccacgctgtgggatgcggcggcg
cgtgcgggcggcaaggtctccgccttcgtcgcgctgatcgagtcgctgcgcagcgcgacg
aaggatctgccgttgccggagatcatggatcatgtgctggagcacagcggtctggtcgcg
cattacgaaagcgagaagacctctgcctcgaagaagcgcgaggcggaagagcggctggag
aacctgaacgaactggtcaatgccgcgacactgttcgtgcacgagaacgaggacgacagc
ctcaccgctttcctgacccacgcttcgctcgaagcgggcgagcatcaggcgggcgacagc
gaggatgcactgcacctgatgacggtgcatgcagccaagggcctggagttccacaccgtg
ttcatcacggggctggaagagggattgttccctcaccagaacagccagaacgtggacggc
ggactggatgaggagcgccgcctgatgtacgtggcgatcacgcgcgcgcggcgccggctg
tacctcaccttcgctcagagccgcatgctgcacggcaaggtgaactacggcatggcgtcg
agcttcctgcgcgagctgccggaagagctgctgctctggctgacgccgcgcgtgagcgca
cgccggacattcggcaacagcagctacgaaacgagcagctacgttgcggcgtttggcggg
gcatcagcagagcccgcacctccgccacccggtgcgttgtggaagatgggtcagcgcgtg
ttccaccagaagttcggcgagggcaccgtcaccggcatcgagggcggcggcgcggacgcg
cgcgtacaggtcaacttcaaacacgcgggcagcaagtggctcgcgctcgaatatgccaag
ctcactgccgtctga
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