Flavisolibacter tropicus: SY85_07860
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Entry
SY85_07860 CDS
T04392
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
fla
Flavisolibacter tropicus
Pathway
fla03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SY85_07860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fla03400
]
SY85_07860
DNA repair and recombination proteins [BR:
fla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SY85_07860
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SY85_07860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
nSTAND1
AAA_29
RsgA_GTPase
AAA_16
AAA_21
DnaJ_CXXCXGXG
nSTAND3
Viral_helicase1
FragX_IP
Motif
Other DBs
NCBI-ProteinID:
ANE50421
UniProt:
A0A172TTI9
LinkDB
All DBs
Position
complement(1886888..1889788)
Genome browser
AA seq
966 aa
AA seq
DB search
MKKGTKKPIEVPVDGEFIEVYGAREHNLKNIDINIPKNQLVVITGISGSGKSSLAFDTIF
AEGQRRYMETFGAYARQFMGEMERPDVDKIMGLSPVISIEQKTTNKNPRSTVGTVTEIYD
FLRLLYARASEAYSYNTGKKMVKWSEDEIVNNLFKKLDGYKVTFLAPLVRGRKGHYRELF
EEVRKKGFLKVRVDGEIKDLTPKMQLDRYKIHDIELVVDRLKVEKSMRTRISQSVQQSLK
LGKDLMFVAYEKDNGSGAGEVSYSRQLMCEDTGISYEEPSPNSFSFNSPYGACPTCKGLG
QVYNVSMSAIIPDDSLSINEGGIAPLGGEREAYSFRQVQQLARRNKFSLDKPVKDLPEKA
LNLLLYGKEEGITGDELHFDDEEISEGSSNGEFEGVVNQIKRWFATSTSEAIQRWAEAFM
ELTTCPTCNGTRLKKESLWFKVDGRNISELSQLDLVQLAAWFKDIESRMSQKQNVIAREL
NKEIRERLQFLLDVGLTYLTLNRPTRTLSGGESQRIRLATQIGSQLQGITYILDEPSIGL
HQRDNHRLITALKNLRDIGNSVLVVEHDKDIMLAADHLIDIGPKAGYHGGRVMGQGKPED
VLRNDTLTAHFLNGEREIEVPKERRKGNGKTITLKGVTGNNLKNVSTTFPLGKFIVVSGV
SGSGKSTLINDTLYPILSHHCYGSKGTPMPYKSIKGLEHIDKVIEIDQTPIGRTPRSNPA
TYCGFFTEIRTLFASIPEAKIRGYNAGRFSFNVKSGRCEVCEGGGMRVIEMNFLPDVYVH
CEKCNGKRYNRETLEIRYKGKSIADVLDLTVEEAVEFFQNVPFLYRKIKVLQDVGLGYIT
LGQSAVTLSGGEAQRVKLATELAKKDTGKTFYILDEPTTGLHFEDIHHLLEVLNKLVDRG
NTVLVIEHNLDVVKVADHIIDLGPEGGSGGGQILFEGTPEDLVKVKASFTGQFLKDELKP
RKKLLN
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagggacaaagaagccaatcgaagtgccggtagatggagagtttattgaagta
tacggcgccagagagcataatttgaagaatattgatattaacattcctaaaaatcagctt
gttgttattactggtataagtggtagtggtaagtcttctttagccttcgataccatcttt
gcagaaggacagcgacgctatatggaaacctttggagcctatgcccgtcagtttatgggc
gagatggagcgtccagatgtagacaaaatcatggggttatctccggttatctctatagaa
caaaagactaccaataaaaaccctcgttctactgttggtactgtcacggagatctatgac
ttccttcgtttattatatgcacgtgccagcgaggcttattcttacaacaccggtaagaaa
atggttaagtggagtgaagatgaaattgtcaataaccttttcaaaaagctggatggctat
aaagtaacatttctggcacctttagtaagaggtagaaaaggacattaccgcgaactattt
gaagaagtacgaaagaaaggttttttaaaagttcgtgtagatggagaaataaaagaccta
acgcctaaaatgcagttggaccgctataagattcatgatatagaactggtagtggaccgt
ctgaaagtagaaaaatcaatgcgcacacgcattagccaaagtgtacaacaatcgttgaag
cttggtaaggacctgatgtttgtggcctatgaaaaagataatggaagcggtgctggtgag
gtatcttatagccgtcagttgatgtgtgaagacacgggtatttcgtatgaagaaccatca
ccaaactcgttttcttttaactcaccttatggtgcttgtcctacttgtaaaggcttaggg
caagtatataatgtaagtatgagtgctataatccctgatgatagtttaagtattaatgag
ggtggtatagcacctttgggtggcgaacgtgaggcttattcttttagacaggtacagcaa
ctagccagacgcaataaattcagtttagataagccggttaaagatttgccagagaaggca
ttaaacctgttgctgtatggaaaagaagaaggaataacaggcgatgaactgcattttgat
gatgaagaaataagtgaaggttcaagcaatggtgagtttgaaggtgttgtaaatcaaata
aagcgttggtttgctaccagtacatccgaggccatacagcgatgggcagaagcttttatg
gagctaactacttgccctacatgtaatggtacacgccttaaaaaagaaagcttgtggttc
aaggtagatggaagaaatatttcagaactcagtcaattggacctggtgcagcttgcggct
tggtttaaagatattgagagccgtatgagccaaaagcaaaatgttatagcccgtgagttg
aataaggaaatacgggagcggttgcagtttttgctggatgtgggattaacctacctgaca
ttaaatagaccaacgcgaaccctaagtgggggagagagccagcgtatccgcttagctacg
cagatcggatctcaattgcaaggcatcacttacattttggatgaaccttctattggatta
caccagcgtgataaccaccggttaattacggcgttaaagaaccttcgtgatattggaaac
agtgtgttggttgtagagcatgataaagacattatgttggcggcagaccatcttattgat
attggccctaaggctggctatcatggtggccgcgtgatgggacagggcaaaccggaagat
gttttgagaaatgataccctgacagcacattttttaaatggcgaaagagaaattgaagtt
ccaaaggagcgtcgtaaaggcaatggtaagactattacattgaaaggtgtaacagggaat
aatttaaagaatgtaagtactacattcccattaggtaagtttatcgttgtttctggtgtt
agcggtagtggaaaatcaacactaattaatgatacgctgtatccgatcttatcgcatcac
tgttatggatctaagggtacacctatgccttataaatccataaaaggcttagagcatatt
gataaggtcattgaaattgatcaaacgcctatcgggcgtacaccgcggagcaaccccgct
acctattgtggcttctttacagaaatcagaacactgtttgcttcaattcctgaagcaaag
atccgtggctacaatgcaggacgcttttcctttaatgtgaaaagcggccgttgtgaagtg
tgcgaaggtggtggtatgcgggttattgaaatgaacttcctgcccgatgtatatgtgcat
tgcgaaaagtgcaatggtaagcgctacaacagggaaacattagagatccgctacaaagga
aagtccattgccgatgtattggacctaacagtagaagaggcggtagagttttttcaaaat
gttcccttcctttacagaaaaatcaaagtgttgcaagatgtagggttagggtacatcacg
cttgggcaatcggccgttaccttatcaggtggtgaagcgcagcgtgtaaaactggcaact
gagctggcgaagaaagatacaggtaagaccttttatattttagatgagccaactacaggc
ttgcattttgaagatatccatcacttgttagaggtacttaataaattggtggatagaggt
aatacggtactggttattgaacataatctggatgttgtgaaagtagcagaccatattatt
gatcttggccctgaagggggttctggtggaggacagattttgtttgaaggtacaccggaa
gacctggttaaagttaaagcaagctttacagggcagttcttaaaagatgaattgaagccc
aggaaaaaactgttgaattaa
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