Flavisolibacter tropicus: SY85_09250
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Entry
SY85_09250 CDS
T04392
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
fla
Flavisolibacter tropicus
Brite
KEGG Orthology (KO) [BR:
fla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fla03032
]
SY85_09250
03400 DNA repair and recombination proteins [BR:
fla03400
]
SY85_09250
Enzymes [BR:
fla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SY85_09250
DNA replication proteins [BR:
fla03032
]
Prokaryotic type
DNA Topoisomerases
SY85_09250
DNA repair and recombination proteins [BR:
fla03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SY85_09250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
DUF2207_C
DnaD_N
DUF4119
Motif
Other DBs
NCBI-ProteinID:
ANE50662
UniProt:
A0A172TUJ1
LinkDB
All DBs
Position
2229667..2230746
Genome browser
AA seq
359 aa
AA seq
DB search
MEVVQLTHKEFLKIDKDYSQAAKIADLHYVNDKQAGIQRIKKGQGFSYIYNDQLLTDEAE
LERIKKLAIPPAWTNVWICPKSNGHIQATGFDTRSRKQYRYHEQWQTLRNETKFHRLYEF
GKLLPSLRLKLEEDFSNKELSEEKVIATVISLMERTYIRIGNNEYEKINGSYGLTTLKDK
HVKIEGDKIRFSFKGKKGIDHDISLRSRKLAKAVQACRDIPGKELFQYYDVEGNKKPIDS
GCVNNYIKDATGGDFTAKDFRTWAGTLNILRAFRTLGEAPSETECKKNVISALDEVSKKL
GNTRTVCKKYYVHPGIIKLYEGNSLNKYLKELDEIEKADFLTGLTSEERVLMKILQQLV
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atggaagtagtacaactcacgcataaagaatttttaaagatcgataaggattatagccaa
gcagctaagatcgccgacctccattacgtaaatgacaaacaggctggtatacaacgtatc
aaaaaagggcaaggctttagctatatctataacgatcaactgctaactgatgaagcggag
ctggagcgaattaaaaagctggctattccgccagcctggactaacgtttggatctgtcct
aagtccaatggtcatatacaggctaccgggtttgatacccgtagtcggaaacagtatcgt
taccacgagcaatggcaaacattacgcaacgaaacaaagtttcaccgcctttatgaattt
ggaaagcttttaccctctttacgcctaaaattggaagaggacttttcaaacaaggagtta
agtgaagaaaaggttattgcaacagttattagtcttatggagcgcacctatatacgaatt
ggcaataatgaatacgaaaaaataaatgggtcgtatggattaaccaccttaaaagacaaa
cacgtcaaaattgaaggtgataaaatccgcttctcttttaaaggaaagaagggtattgac
catgacattagccttcgtagtcgtaaactagcaaaggccgttcaagcttgtcgagatatt
ccgggcaaagaactgttccagtactacgacgtagagggcaacaaaaaacctattgactct
ggatgcgtgaacaattatataaaagacgctacaggaggtgattttacagcaaaggatttc
cgcacatgggcaggcactttaaatatcctaagagcttttagaactttgggggaagcccca
tctgagaccgagtgcaaaaagaatgtgattagtgccctggacgaagtaagcaagaaacta
ggtaatactcgaacagtttgcaaaaagtactatgtacaccccggcattataaaactttat
gaaggcaatagccttaataaatacctgaaagagctggatgaaattgaaaaggcagatttt
cttactggtcttacttcagaggaaagagtattaatgaagattctccaacagttggtttaa
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