KEGG   Flavisolibacter tropicus: SY85_18120
Entry
SY85_18120        CDS       T04392                                 
Name
(GenBank) RNA polymerase sigma-70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
fla  Flavisolibacter tropicus
Pathway
fla02020  Two-component system
Brite
KEGG Orthology (KO) [BR:fla00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    SY85_18120
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:fla03021]
    SY85_18120
Transcription machinery [BR:fla03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     SY85_18120
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r4 Sigma70_r2 Sigma70_ECF GerE HTH_10 HTH_20 HTH_40 PF0610-like_N HTH_5 PCI HTH_24 UPF0122 DUF7123 DUF6362
Other DBs
NCBI-ProteinID: ANE53582
UniProt: A0A172U2X2
LinkDB
Position
4257279..4257836
AA seq 185 aa
MSAYATHTDEELVRLIKTGDTAAFTEAYNRYWEQLLALGYYYTHQKQAAEDIVHEVFTSL
WARRTELPIQSLKAYLATAVKFSVFKTIARDKRRRELQQGMNIPEHTTDVEEKLDARFLQ
DYLNGVVEQLPDKARLVFTYSRAEELSVKEIATKMDLSPKAVEYHMTKALRALKEAVKKI
KFFFV
NT seq 558 nt   +upstreamnt  +downstreamnt
atgagcgcgtatgccacacataccgacgaagagctggtgcgcctaatcaaaacaggcgac
accgctgcgtttaccgaagcctacaaccggtattgggagcagctgctggccctgggctat
tattacacgcaccagaaacaagccgctgaagacatcgtccacgaagtattcacaagccta
tgggcacgacgaaccgagctgcccattcaatccctgaaagcctacctggccaccgcagtg
aagttttctgtatttaaaaccattgcacgtgataaacgacgacgcgagctgcagcagggg
atgaatataccggaacacaccaccgacgtagaggaaaagctggatgcccgcttcttgcaa
gattatctcaatggcgtggtggagcaactgcccgacaaagcacgcctggtgtttacttac
agccgcgcagaggagttgtcagtaaaagagattgctaccaaaatggacctttcccccaaa
gctgttgaataccacatgaccaaggccctgcgcgccttaaaagaggcggtcaaaaaaata
aaattcttttttgtttag

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