Flavisolibacter tropicus: SY85_18120
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Entry
SY85_18120 CDS
T04392
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
fla
Flavisolibacter tropicus
Pathway
fla02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
fla00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SY85_18120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fla03021
]
SY85_18120
Transcription machinery [BR:
fla03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SY85_18120
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
Sigma70_ECF
GerE
HTH_10
HTH_20
HTH_40
PF0610-like_N
HTH_5
PCI
HTH_24
UPF0122
DUF7123
DUF6362
Motif
Other DBs
NCBI-ProteinID:
ANE53582
UniProt:
A0A172U2X2
LinkDB
All DBs
Position
4257279..4257836
Genome browser
AA seq
185 aa
AA seq
DB search
MSAYATHTDEELVRLIKTGDTAAFTEAYNRYWEQLLALGYYYTHQKQAAEDIVHEVFTSL
WARRTELPIQSLKAYLATAVKFSVFKTIARDKRRRELQQGMNIPEHTTDVEEKLDARFLQ
DYLNGVVEQLPDKARLVFTYSRAEELSVKEIATKMDLSPKAVEYHMTKALRALKEAVKKI
KFFFV
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgtatgccacacataccgacgaagagctggtgcgcctaatcaaaacaggcgac
accgctgcgtttaccgaagcctacaaccggtattgggagcagctgctggccctgggctat
tattacacgcaccagaaacaagccgctgaagacatcgtccacgaagtattcacaagccta
tgggcacgacgaaccgagctgcccattcaatccctgaaagcctacctggccaccgcagtg
aagttttctgtatttaaaaccattgcacgtgataaacgacgacgcgagctgcagcagggg
atgaatataccggaacacaccaccgacgtagaggaaaagctggatgcccgcttcttgcaa
gattatctcaatggcgtggtggagcaactgcccgacaaagcacgcctggtgtttacttac
agccgcgcagaggagttgtcagtaaaagagattgctaccaaaatggacctttcccccaaa
gctgttgaataccacatgaccaaggccctgcgcgccttaaaagaggcggtcaaaaaaata
aaattcttttttgtttag
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