Flavobacterium sp. CLA17: HAV12_003940
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Entry
HAV12_003940 CDS
T11036
Symbol
rpsC
Name
(GenBank) 30S ribosomal protein S3
KO
K02982
small subunit ribosomal protein S3
Organism
flav Flavobacterium sp. CLA17
Pathway
flav03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
flav00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
HAV12_003940 (rpsC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
flav03011
]
HAV12_003940 (rpsC)
Ribosome [BR:
flav03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
HAV12_003940 (rpsC)
Bacteria
HAV12_003940 (rpsC)
Archaea
HAV12_003940 (rpsC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_S3_C
KH_2
VAR1
MRP-S24
KH_KhpA-B
Ig_Shg
Motif
Other DBs
NCBI-ProteinID:
QSB27910
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All DBs
Position
925741..926502
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AA seq
253 aa
AA seq
DB search
MGQKTNPIGNRLGIIRGWDSNWYGGNDYGDKLAEDHKIRKYIHARLSKASVSKVIIERTL
KLVTVTITTARPGIIIGKGGQEVDKLKEELKKVTDKEVQINIFEIKRPELDAYLVATSIA
RQIESRISYRRAIKMAIAASMRMNAEGIKVLISGRLNGAEMARSEGFKEGRIPLSTFRAD
IDYALAEAHTTYGRMGIKVWIMKGEVYGKRDLSPLAGMDKKQSGTGGGKGGDSPRGDRKP
FNKGGKPDARKRK
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgggacaaaagacaaatccaattggaaatagacttggtatcatcagagggtgggactca
aactggtatggtggaaatgattacggtgataaacttgccgaagatcacaaaatcagaaag
tatatccacgctcgtttatcaaaagctagtgtatctaaagtaatcatcgagagaactttg
aaacttgtaaccgttactatcactactgccagacctggtatcattatcggaaaaggtgga
caagaggtagacaagttgaaagaagaacttaagaaagttactgacaaagaggttcaaatc
aacatctttgaaattaaaagacctgaattagatgcttatcttgtggcgacaagcatcgct
cgtcaaatcgaaagtcgtatttcttacagacgtgcaatcaaaatggctattgctgcttct
atgcgtatgaacgctgaaggtatcaaagttttgatttctggtcgtttgaatggtgctgag
atggcgcgttcagaaggtttcaaagaaggtagaattcctctatcaactttcagagctgat
attgattatgctttggctgaagctcacactacttatggtagaatgggtatcaaagtatgg
atcatgaaaggtgaagtttatggaaagagagatctttccccacttgcaggaatggataaa
aaacaatccggaactggtggtggtaaaggtggagattctccgagaggagacagaaaacct
tttaataaaggtggtaaaccagacgctcgtaaaagaaagtaa
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