Flavobacterium sp. CLA17: HAV12_004650
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Entry
HAV12_004650 CDS
T11036
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
flav Flavobacterium sp. CLA17
Pathway
flav02024
Quorum sensing
flav03060
Protein export
flav03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
flav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
HAV12_004650 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HAV12_004650 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HAV12_004650 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
flav02044
]
HAV12_004650 (ffh)
Enzymes [BR:
flav01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
HAV12_004650 (ffh)
Secretion system [BR:
flav02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
HAV12_004650 (ffh)
Eukaryotic Sec-SRP protein
HAV12_004650 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
AAA_22
cobW
CbiA
AAA_17
nSTAND3
AAA_33
CLP1_P
AAA_24
DUF5693
AAA_31
SDH_protease
APS_kinase
KTI12
AAA_18
6PF2K
TsaE
NPHP3_N
ATP_bind_1
NACHT
DO-GTPase1
AAA_16
MMR_HSR1
ArsA_ATPase
Motif
Other DBs
NCBI-ProteinID:
QSB28047
LinkDB
All DBs
Position
1067837..1069189
Genome browser
AA seq
450 aa
AA seq
DB search
MFDNLSDKLDKAFHILKGHGKITEVNVADTLKEVRRALLDADVNFKIAKDFTTKVKEKAI
GQDVLTTLQPGQLLVKLVKDELTELMGGDVAGINLSGNPSIILMSGLQGSGKTTFSGKLA
NFLKTKKNKKPLLVACDIYRPAAINQLHVVGDQIGVEVYSEPENKNPVEIAQNAIKHAKA
NGFNVVIVDTAGRLAVDKEMMDEIARVHKAIEPQETLFVVDAMTGQDAVNTAKAFNDILN
FDGVILTKLDGDTRGGAAISIKSVVNKPIKFVGTGEKMEAIDVFYPDRMAERILGMGDVV
SLVERAQEQFDEEEARKLQKKIAKNEFGFDDFLTQIQQVKKMGNMKDLVGMIPGASKAMK
DVEIEDDAFKHIEAIIHSMTPIERSKPSIIDVKRKARIAKGSGTKVEQVNQLMKQFDQMS
KMMKMMQGPGGKNLMKMMGGMKGMPGGMPR
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgtttgataatttaagtgataagttagataaagcgttccatatactaaaaggacacggg
aaaattacagaagtaaacgttgccgataccttaaaagaagttcgtcgtgccttattggat
gccgatgttaactttaaaattgcaaaagattttacgaccaaagtaaaagaaaaagcaata
ggtcaggacgttttaaccacacttcagccaggtcagttattagtaaagttagtgaaagat
gaactaacggaattaatgggtggcgatgttgccggaattaatctttccgggaatccgagt
attattttaatgtcaggtttacaaggttccggtaaaacgactttctccggaaaactggct
aactttttaaagacaaagaaaaacaaaaaaccacttttagtagcctgtgatatctaccgt
cctgcggcgatcaaccagttgcacgttgtgggagaccaaataggggttgaggtatactca
gaaccggaaaataaaaatcctgtcgaaattgctcaaaatgcaattaaacatgctaaggca
aacggttttaacgtagttattgtcgatacagccggacgtttggcagtagataaggaaatg
atggatgaaattgcccgcgttcataaagcaattgagcctcaggaaaccttgtttgttgtg
gatgctatgacaggacaagatgctgtaaacacggcaaaagctttcaacgatatcctgaac
tttgacggagttattttaacaaaattagatggtgatacccgtggtggagctgccatttcg
attaaatcggttgtaaacaaaccaatcaaatttgtaggtacgggagagaaaatggaagca
attgatgttttctatccggatcgtatggccgaacgtatcttaggtatgggtgacgttgtg
tcgcttgttgaaagagcacaggaacaatttgatgaagaagaagccagaaaacttcaaaag
aaaatcgctaaaaacgaatttggttttgatgatttcctgacacagattcagcaagttaaa
aaaatgggtaacatgaaagacctggttggaatgattccgggtgcttcaaaagccatgaaa
gatgttgaaatcgaagacgatgctttcaaacatatcgaagcgatcattcattcaatgact
ccaatcgaaagaagtaaaccttccataatcgatgtgaaaagaaaagccagaatcgcaaaa
ggttccggaacgaaagtcgagcaggtaaatcagttgatgaagcagtttgaccaaatgagc
aagatgatgaaaatgatgcagggtccgggcggaaaaaacctgatgaaaatgatgggaggc
atgaaaggaatgccaggcggaatgccgagataa
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