Flavobacterium sp. CLA17: HAV12_005435
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Entry
HAV12_005435 CDS
T11036
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
flav Flavobacterium sp. CLA17
Brite
KEGG Orthology (KO) [BR:
flav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
flav03400
]
HAV12_005435
Enzymes [BR:
flav01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
HAV12_005435
DNA repair and recombination proteins [BR:
flav03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
HAV12_005435
Prokaryotic type
HAV12_005435
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QSB28194
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All DBs
Position
complement(1230956..1232248)
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AA seq
430 aa
AA seq
DB search
MKQKVTFFWFRRDLRLEDNVGLFHALQSDFPVIPLFIFDEDILENLPKNDARVSFIYDSL
QKINEELKTIESAILIKKGKTAEVWKSLLTQFDIQKVLFNKDYEPYAIKRDSEISSLVQQ
NGAGSLSYKDHVIFEEKEITKSDGLPYTIYTPYKNKWLEKYHLSGQAPEYDTKPLFSNFA
KNQFEFPELSEIGFERSSIKVLPHNLTQISNYKETRDFPALDSTSYLSPHLRFGTVSIRK
LVNWANKKNQTFLSELIWREFFIQILFSFPHVVNHNFKPAYDGIEWSNNEDDFKRWCSGT
TGYPMVDAGMRQLNETGYMHNRVRMVVASFLCKHLLINWQWGEAYFAEKLLDFELASNVG
NWQWAAGTGCDAAPYFRVFNPEIQQKKFDEKGSYIRKWIPEFDLGYNAPMVDHAFARDRA
IATYKKGIVK
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaaaagttacctttttttggttccgacgcgatttacgattagaagacaacgta
ggtttatttcatgccttgcaatctgattttcctgtaattccattattcatttttgatgaa
gacattcttgaaaatcttccaaaaaacgatgcaagggtaagttttatttatgattctctt
cagaagataaacgaagaacttaaaacaattgaatcggctattttaattaaaaaaggaaaa
actgccgaagtctggaaatcgctgttaacccaatttgacattcagaaagtcctattcaat
aaagattacgagccctacgccatcaaacgcgattcagagattagcagcttagtgcaacaa
aatggtgcaggctctttatcatacaaagatcacgtcatttttgaagagaaagaaatcaca
aaatcagacggactgccgtacacaatttatacgccttataaaaacaaatggctggagaaa
taccatctttcgggacaagctccggaatatgataccaaacctttgttttcaaacttcgcc
aaaaatcaatttgaatttccggaattatctgaaataggttttgaaagaagttccataaaa
gtccttcctcataacctgacacaaatttccaattataaagaaacaagagattttccggcg
ttagacagtacttcttatctttccccgcatttgcgttttggaactgttagtatccgaaaa
ttagtgaattgggccaataagaaaaaccagacttttttaagtgaactgatctggagggaa
ttttttattcagattctgtttagttttccacatgtagtcaatcacaattttaaaccggct
tacgacggcattgaatggagtaataacgaagacgattttaaacgctggtgctccgggaca
accggatatcctatggtcgatgcgggcatgcggcagctcaacgaaaccggttatatgcac
aaccgtgtacgaatggtagtcgccagctttttatgcaaacatttactgattaactggcag
tggggtgaagcttattttgccgaaaaattattagatttcgaattggcttccaacgtaggc
aactggcaatgggctgcaggaacgggctgtgacgccgcaccctatttcagagtctttaat
cctgaaattcaacaaaagaaatttgacgaaaaaggaagctacatccgcaaatggattccc
gaatttgatctgggttataatgccccaatggtcgatcatgcttttgcaagagatcgggct
attgctacttataaaaaggggatagtcaaataa
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