Flavobacterium sp. CLA17: HAV12_007475
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Entry
HAV12_007475 CDS
T11036
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
flav Flavobacterium sp. CLA17
Brite
KEGG Orthology (KO) [BR:
flav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
flav03016
]
HAV12_007475 (truA)
Enzymes [BR:
flav01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
HAV12_007475 (truA)
Transfer RNA biogenesis [BR:
flav03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HAV12_007475 (truA)
Prokaryotic type
HAV12_007475 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
QSB28566
LinkDB
All DBs
Position
complement(1697041..1697775)
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AA seq
244 aa
AA seq
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MRYFIQFAYNGTHYHGWQIQPNASSVQETLNKALSVLLNTPINVMGAGRTDTGVHAHQMY
AHFDFENQIDVPVLVHKLNSYLPKDIAIFNLIEVHDDAHCRFDATKRTYEYHINTVKNPF
LEELSWYFNQKLDVVLMNEAAKILLNHTDFQCFSKVNTDVNTFDCMVFEAYWTTENNKLV
FTISANRFLRNMVRSIVGTLISIGLHKISLADFETIIASKSREKAGFSVPAHGLYLTEID
YEYI
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
ttgagatattttattcaattcgcatacaacggaacacattatcacggctggcaaattcag
cctaacgcctcttctgttcaggagactttaaacaaggcgctttcggttttgttaaatacc
cccataaatgtgatgggtgccgggcgaaccgatacgggtgttcatgcacatcaaatgtat
gctcattttgattttgaaaatcagattgatgttccggttttagtacacaaactcaactcc
tatttaccaaaagacattgccatttttaatcttattgaggttcatgatgacgcgcattgt
cggtttgatgcgacgaagagaacgtacgaatatcacatcaacactgttaaaaatccattt
ctggaagaattgagttggtattttaatcaaaaattagacgtagttttgatgaatgaagcc
gcgaaaatcctactgaatcataccgattttcaatgtttttcgaaagtaaatacagatgtc
aatacattcgactgcatggtttttgaggcgtattggactactgaaaataacaagcttgtt
tttacgatttcggcgaatcgttttctaagaaatatggtgcgctcaattgtcggtactttg
atcagtattggtttacacaaaatttcactggccgattttgagacgattattgcgagtaaa
agcagagaaaaagccggattttcagttccggcacacggattatatttaactgaaattgat
tacgaatatatttag
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