KEGG   Flavobacterium sp. CLA17: HAV12_009840
Entry
HAV12_009840      CDS       T11036                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
flav  Flavobacterium sp. CLA17
Brite
Enzymes [BR:flav01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     HAV12_009840
    5.6.2.6  RNA 3'-5' helicase
     HAV12_009840
DNA repair and recombination proteins [BR:flav03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    HAV12_009840
SSDB
Motif
Pfam: WH_Lhr DEAD_assoc DEAD Helicase_C ResIII DUF5363
Other DBs
NCBI-ProteinID: QSB29013
UniProt: A0A7Y3TFQ4
LinkDB
Position
2328707..2331166
AA seq 819 aa
MNREQLFTVANDWFHQQGWKPFPFQTQTWTAFLQGKNGLLNAPTGSGKTYALWLPIVLNY
IRKNPNYKTKHTPGLKAIWITPLRSLSVEIKQAAERVVLDLETKMTVGIRSGDTSASERA
KQKGKMPDLLVTTPESLQLLLATKGYDKIFGNCEAIVIDEWHELLGTKRGVQTELALSRL
KKIAPNMRIWGISATIGNLKQAQEVLLGVDSEAYHNSVLIKAAIHKKIKVISIIPDKMET
YPWRGHMGLHLIDEVAKIIKASKTTLVFTNVRSACEIWFQRLLEKYPEFAGEMAMHHGSI
SRETRLWVEDAIRNEELKVVVCTSSLDLGVDFAPVETIIQVGGPKGVARFLQRAGRSGHQ
PGKESVIYFLATHAIELIEASALKKAVENNVIEDRVPYLNSWDVLVQYLNTLAVSDGFFP
DEIFEEVKGTFCYQAMTKENWNWILNFISNGSQSLQAYDEYKKVDVEEDGRFKINSRLIA
MHHRMQIGTIIGDSVLNVKYMSGGYIGTIEEWFITKLKPGDTFIFAGKKLELFKIRNMQV
LVRKADPKKTSKIVSWMGGRMALSAQMSELLRQELYRANTDDLSPELKALHPLFIRQRKE
SIVPNANEFLIETFKTREGYHAIFYPFEGRFVHEALASLLAYRISLLGPISFSLAYNDYG
FELLSDQEMNMQEVLDNNLFSTAYVHDDLQKSLNATEMARRKFRDIAVISGLVFTGFPGK
MVKTKHLQSGSQLLFEVFRDYEPDNLLFQQAYRETFEHQLEEGRLIMALERIQKQEIVWK
SCVKPTPFSFPLITDRLREKLSSETLAERIKKMTAFYMK
NT seq 2460 nt   +upstreamnt  +downstreamnt
atgaacagagagcagctttttactgtggcaaatgattggtttcatcaacagggatggaaa
ccttttccgtttcagacgcaaacctggacggcttttttgcagggtaaaaacggtcttctg
aatgccccgacaggaagtggaaaaacctatgcactctggctgccgattgttttaaactac
atcaggaaaaacccaaattataaaacgaaacatacacccggactaaaagccatctggatc
acacccctgcgatctctttcggtagaaatcaaacaggctgcagaacgtgttgtgctggat
ctggagaccaaaatgacggtcggaatccgttccggagatacgtctgcaagtgagagggcg
aaacaaaaagggaaaatgcccgatttactggtcactactcccgaaagcctgcaattactg
ctggcgactaaaggctacgataaaatttttggtaattgcgaagcgattgtaatcgatgaa
tggcatgaattgctgggtaccaaaagaggcgtacaaaccgaattggctttgtccagactg
aaaaaaatagcgcccaatatgcgtatttggggaatttctgcgacgatcggcaatttgaag
caggcgcaggaagttctactcggagtggattctgaggcataccataattcggttttgatt
aaagccgccattcacaaaaaaataaaagtcatttctatcattcccgataaaatggaaacc
tatccgtggcgtggacatatggggttacatttgattgacgaagtcgcaaaaatcatcaaa
gccagtaaaacaacgcttgtttttaccaatgtgcgttcggcctgtgaaatttggtttcag
cgtttactcgaaaaataccctgagtttgccggagaaatggcaatgcatcacggaagtatc
agccgcgaaacccgcctttgggtcgaggatgcgattcgcaatgaagaattaaaagtggtc
gtttgtacctcaagtctggatctgggggttgattttgcgcccgtagaaacgattattcag
gtgggaggtcccaaaggcgttgcccgttttttgcagagagcaggacgaagcggacaccag
cccggaaaggaaagtgttatttactttctggcaacacatgcaattgaactgatagaagct
tcggccttaaaaaaggcagtcgaaaataatgttattgaagatcgggttccgtatctgaac
agttgggatgttttggtacaatatctgaatacgcttgccgtttcggatgggtttttccct
gacgaaatttttgaagaagtaaaaggaacattctgttatcaggccatgaccaaagagaac
tggaactggattctgaattttatttcaaacggaagtcagagtttacaggcctatgacgaa
tataaaaaagtggatgtagaggaagacggccgctttaaaattaacagccgtctgatcgcc
atgcaccacagaatgcagattggaaccatcattggtgattcggttttgaatgtgaaatac
atgagcggcggttatatcggaacgattgaagaatggtttatcaccaaattaaaaccggga
gacacttttatttttgccggtaaaaaactcgaattatttaagatccggaacatgcaggtt
ctggtacgaaaggcagaccccaaaaaaacatcaaaaattgtgagctggatgggcggacgt
atggcgctttcggcacaaatgagcgaactgctgcgccaggaattataccgcgcgaatacc
gatgatctttcaccggaactaaaagcgcttcatcctttatttatcagacagcgaaaggaa
tctattgtgcccaatgcaaatgagtttttaattgaaacttttaagacaagagaaggatat
catgctattttttatccgtttgaaggccgttttgtacacgaagcactggcaagtttactg
gcctacagaatcagtttattaggtccgatcagcttctcactggcgtataatgattatgga
tttgaattgctttcggatcaggaaatgaatatgcaggaagtactggataataatttattt
tcgactgcctacgtacatgacgatttgcaaaaaagcctgaatgctaccgaaatggccaga
cgaaaattcagggatattgccgtgatttcgggattggtttttacgggatttcccggaaaa
atggtcaaaacaaaacatttacaaagcggctcacaattgctgtttgaagtctttcgggat
tacgaacccgataatttattattccagcaggcgtatcgggaaacttttgaacatcagctg
gaagaaggccgtctgattatggccctggaacgaattcaaaagcaggaaatagtctggaaa
tcctgtgtaaaaccaacaccattcagctttccgttaattaccgacagattaagagaaaag
ctttcgagcgaaacattagcagaacgaatcaaaaaaatgacagctttttacatgaaataa

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