Flavobacterium sp. CLA17: HAV12_009870
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Entry
HAV12_009870 CDS
T11036
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
flav Flavobacterium sp. CLA17
Pathway
flav03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
flav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
HAV12_009870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
flav03400
]
HAV12_009870
DNA repair and recombination proteins [BR:
flav03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
HAV12_009870
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
QSB29019
LinkDB
All DBs
Position
complement(2336227..2337003)
Genome browser
AA seq
258 aa
AA seq
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MRAIWTGAISFGLINIPVKLFSAVQESTLDMDMLDKNDHSNIKFKRVNETTGKEVAYGNI
VKGYKIDDKYVILEEEDFEAADAEKTKTIDILNFTLEKEIDSLYYEQPYYLEPDKGAMKA
YALLRDALEASGKVGVTSFVMRNKEGLAILKPYKNVIVLNRIRFEQEIRDTSELKLPAVS
KTKVKEMEMANKLVEQLTEKFDISSYKDEYTDKLLKIIKDKAKGKKQAAPKLKVVHKQND
DLMEMLKASLENKKKKSS
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgagagcgatatggacaggtgcaattagttttgggttgatcaatattccggtaaaatta
ttttccgccgtacaggaaagtacattagacatggatatgctggacaaaaatgaccattcg
aatattaaattcaaaagagtcaatgaaactaccggaaaggaagtggcgtacggcaatatc
gtaaaagggtacaaaatagacgataaatatgtgatcctggaagaggaagattttgaagcc
gccgatgccgaaaaaacaaaaaccattgacattctaaactttacgctcgaaaaagaaatt
gacagcctttattacgagcagccttattatctagaaccggacaaaggtgccatgaaagcg
tatgccttattgcgcgatgcactggaagcttcaggaaaggtaggcgtaaccagttttgtc
atgcgaaataaggaaggtttagctatcttaaaaccgtataaaaatgtgatcgtgttaaac
agaatccgttttgagcaggaaatcagagatacttctgaattaaaactcccggctgtttct
aaaacaaaagtcaaagaaatggagatggccaataaactggtagaacagcttaccgaaaaa
tttgacatttcgagctataaagatgaatataccgataaacttctgaaaatcatcaaggac
aaagccaaaggcaaaaaacaagctgccccaaaactaaaagtcgttcataaacaaaacgat
gatttaatggaaatgctgaaagcaagtcttgaaaacaaaaaaaagaaaagttcctag
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