Flavobacterium sp. CLA17: HAV12_010435
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Entry
HAV12_010435 CDS
T11036
Name
(GenBank) sigma 54-interacting transcriptional regulator
Organism
flav Flavobacterium sp. CLA17
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
Response_reg
AAA_5
MCM
HTH_8
Mg_chelatase
cREC_REC
AAA
AAA_16
GAF_2
AAA_2
AmiR_N
AAA_19
Motif
Other DBs
NCBI-ProteinID:
QSB29130
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Position
complement(2515783..2517759)
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AA seq
658 aa
AA seq
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MGTLSDENPQSENLVKKSILIVEDQFVEAHDLQLIVEKANYEVLGIARSVDQALERLRTQ
TPDLVFLDIMLKGDKNGIDLAHILKNRNIAFIFISANSSKLILNEAKITCPYGFIIKPFR
EQDILTTLEIAFYRQTYSLESQLMHQFQLKNNISELLNSNLNPEDGLISFAEIIQTFISF
DYLEAGFNAADQYSNIGIVRKNIEEYQTITVSKLSKIAEISIKELDETYKKSQIDILPAI
YSQESLINNFQASPIKGIIAHNFGIRSYLVFPFSAGDSQQFCFTFYSRNFNTYSDENLLL
LKQLQSTLSGLITHLFLDKKAVEPTTIKTAPPKKQHAESTKSGFEGIIGNSSQMATVFNY
IKKVAPSQTSVLILGESGTGKEKIAQSIHALSPRKEKPLVIVNCGAIPENLAESILFGHE
KGAFTGALEKRIGKFELADGGTLFLDEIGEMPMTLQVKLLRVLQEKDIERVGGLVPLKID
VRIIAATNKDLEHEVAAGRFRMDLYYRLYVFPILVPSLRTRKEDIPELADHFIKMYSENM
SIKPPLLSNIALQQLINYNWPGNIRELEHIIQRTILLNEESTIKTIEFSPSSAFKPEQNA
ESFSIKTILDNERDYILYILKKCNGKVSGAGGAAEILNINPSTLTSRIKKLQINKEVS
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgggaacgttgtctgatgaaaacccacaatctgaaaacctggtaaaaaaaagcatcctt
attgttgaagaccaatttgttgaagcacatgatctgcagctaattgtagaaaaagcaaat
tatgaagtacttggtattgcccgttctgtagatcaggctctggaaagactccggactcag
acacctgatctggtatttcttgatattatgcttaaaggggataaaaacggaatagatctg
gctcatatattaaaaaatagaaatattgcgtttatttttatttcagcgaattcaagtaaa
ttaattttaaatgaagccaaaataacatgtccctacgggtttatcattaaaccctttaga
gaacaggatattctgactactcttgaaattgctttttacaggcaaacctatagtctggaa
tctcaactgatgcatcagtttcagcttaaaaataatataagtgaattactaaattcaaat
ctgaatcccgaagacggtttgatctcctttgcagaaataattcagacttttatctctttc
gattatctggaagccggatttaatgctgcagaccagtattctaatattggtattgtgcgc
aaaaacatagaggaatatcaaactattacggtatcaaaactttctaaaatagctgaaatt
tcaattaaggaattagatgaaacttataaaaaatcccagatcgacatacttcctgctatt
tacagccaggaatcgttaatcaataattttcaggcttcccctataaaaggaataatagcc
cataacttcggtatcagatcgtacctggttttcccttttagcgcaggagattcccagcag
ttttgcttcactttctacagcagaaactttaatacttattctgatgaaaatttgcttctt
ttaaagcaattacaaagcacactttccgggctgataactcatctttttttagataaaaaa
gcagtcgagccaacaacaataaaaactgctccaccaaaaaaacaacatgcagaaagtaca
aaatcaggttttgaaggaataattggaaatagttcccagatggcaacggtttttaactat
atcaaaaaagtggcaccgtcgcagacttctgttttgatactgggtgaaagtggcaccgga
aaagaaaaaattgcccaaagtattcatgcattatcaccacgaaaagaaaaacctttagtt
attgtaaactgcggtgcaatacccgaaaatctggctgagtctatactttttggtcatgaa
aaaggagcttttaccggagcactggaaaaacgcataggaaagtttgaattagctgatggc
ggtaccctgtttctggatgaaattggagaaatgccaatgacacttcaagttaaattatta
cgtgttttgcaggaaaaagacatagaacgtgttggtggacttgtaccgctgaaaattgat
gtccgaattatagcagcaaccaataaggatcttgaacatgaggttgcagccgggcgcttc
agaatggatttgtattacaggctttatgtttttccaattttagtaccatcccttagaacc
agaaaagaagatatccctgaactggcagatcattttataaaaatgtacagtgagaatatg
agtataaaacctccattactttctaatatagccttacaacagctaatcaattataattgg
ccgggcaatattagagaactcgaacatattatacaacgtacgattttgcttaatgaagaa
agcaccattaaaacaattgaattttcaccctcatcagcctttaaaccagaacagaatgcg
gaatcattctctattaaaacgatcttagacaatgaacgtgattatattctttatattctt
aaaaaatgtaatggaaaagtttccggagccggcggggcagcagaaattctaaatattaat
ccttcaaccttaacttcaagaattaaaaaacttcaaatcaataaagaagtcagctaa
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