Flavobacterium sp. CLA17: HAV12_011235
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Entry
HAV12_011235 CDS
T11036
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
flav Flavobacterium sp. CLA17
Brite
KEGG Orthology (KO) [BR:
flav00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
flav02000
]
HAV12_011235
Transporters [BR:
flav02000
]
Other transporters
Pores ion channels [TC:
1
]
HAV12_011235
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
CarbopepD_reg_2
CarboxypepD_reg
CooC_C
WH_Lhr
Motif
Other DBs
NCBI-ProteinID:
QSB29277
LinkDB
All DBs
Position
2746048..2749164
Genome browser
AA seq
1038 aa
AA seq
DB search
MKNDLLTNRMFFRLKKATFPLFIVVVILTDVSVNAAENLDSKKNRNSTFKKTEIDIVKGK
VTDETGASLPGVSVLVVGTKKGAVTDIDGNYVIEAKIGDVLQFSYVGLETKNVTVNEAVV
NITLSGGNGETLQDVVVIGSRNPTRTVTESAVPIDVIAMKDIATQGAQTNLNQILNMVAP
SFTSNTQTVADGTDHLDPAQLRGLGPDQVLVLLNGKRRHTSSLVNINGTPGRGSVGTDLN
AIPSFALEKIEVLRDGASAQYGSDAIAGVINLNIKKDTKKLDINLFSGSNFSRNANDHRG
GNDGNHYQLDLNYGTNLGKEKSFINLTGSLQLRDATSRANDATGTIYNAYNAIEQRASED
GININSLFGNISNTPNSTQIINTIKGYAPQVSYFTGAQQTAISNATTIPQLQTALNFDAT
DGELAYRNLERKNFNMRIGQSSFESVQFFLNAAYPINDKLEVYVFGGTSYREGESAGFYR
RPNQSRSYTGLYLDGFLPEIHSTINDLSAAAGLRGTIFKDWNFDLSNTYGRNAFDYNIEN
TVNATLREGSPDEFDAGGLRFTQNTTNFDMSKKFGTLNVAFGAEYRYETYGINAGVPDSY
NQYDINENVVTGTTPANIRVTDFFGAARPGGAQVFPGYRAENAKEENRNSYAFYTDLEWD
ITDKWLLNGAVRFENYSDFGNTTNYKIATRYKLTDNINLRGAFSTGFRAPSLHQIYYEST
ATQFTGGVPFEVGTFSNDSKIAELLGIPKLKQEESTSYSAGFTAKIPSANITITADAYYI
KIDDRVVLTDQFTPTPVTQPLYDQASANAATFFANAIDTESKGIDVVITNKLNLNENMTL
KNDLSGTFSKTRQVGQIHASPVLEAAGQVNTYFSESSRIYLEEAIPRVKVNLTNNLTYKK
LDFFLRNVYFGEVTDPNVADVNGDGFVGATIVNGKAVENEHPVWGGKIITDFSVGFKISA
ITKVVIGANNILDIYPDKNLAPQTARRATGVDAGGNVTYAPAATAIDLSNQNQFVYSRNV
SQFGQNGRFVFARLSFSF
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacgatttattgacaaacagaatgttctttcgactcaaaaaagcaacctttcct
ttatttattgtagttgttattttgactgatgttagtgtaaacgctgctgagaatttagac
agcaaaaaaaacagaaattcaacttttaaaaaaacagaaattgatattgtaaaaggaaaa
gttaccgacgaaactggtgcttccttacctggtgttagcgttttggtagttggtaccaaa
aaaggagccgtaaccgatattgacggaaattatgttattgaagccaaaattggtgatgtt
ctgcaattttcgtatgtaggtttagaaacaaaaaacgtaactgtcaacgaagctgttgta
aatattacattatcgggaggaaatggtgaaacgctgcaagacgtagttgttattggctcg
cgtaatcctaccagaacagtaacagaatcagccgttcctatagatgtaattgcaatgaaa
gatattgctacgcaaggtgcacaaaccaatttaaatcagattttgaatatggtggcgccc
tcgtttacttccaatacccaaactgtagctgatggaactgaccatcttgaccctgcgcaa
ttaagaggtttaggtcctgatcaggtattggttttattaaatggaaaaagaagacatacc
tcatcattggtaaacattaacgggacgccgggaagaggatctgtagggacagatctcaat
gctattccgtcttttgcccttgaaaaaattgaagttttaagagatggagcttctgctcaa
tatggatcagatgcgattgcgggcgtgatcaatcttaatataaaaaaagacactaaaaaa
ctcgatatcaatctcttttcaggaagtaatttttcgagaaatgcgaacgatcacagaggc
ggtaatgacggtaaccattatcaattggatctaaactatggtacaaatttaggtaaagaa
aaaagctttattaacttaacaggaagcttacaattacgcgatgccacgagcagggctaat
gatgcaacaggtacaatttacaatgcttataacgctattgaacaaagagcttcggaagac
ggaattaatatcaattctctttttggaaatatttctaacacacccaattctactcaaatc
atcaatacaataaaaggatatgcaccgcaagtaagctactttacaggggcacaacaaact
gcgatcagcaatgcgaccactattccgcaattgcaaaccgctttaaactttgatgccacc
gatggagaactagcgtatagaaatcttgaaagaaagaattttaatatgagaatcggtcag
tcttcgtttgaaagtgttcagttctttttgaatgctgcttatcctataaatgacaaattg
gaagtttatgtatttggaggaaccagttacagagaaggtgaatctgccggcttttacaga
agacctaatcaatccagatcgtacacaggcttgtatttagatggttttttacctgaaatt
cattcgacaataaatgatctttctgcggcagcagggctaagaggaaccattttcaaagat
tggaattttgatttgagtaatacgtatggtcgaaatgcctttgattataatatagaaaac
accgtaaatgcaaccttaagagagggctctcccgatgaatttgatgcaggaggtttgcgt
tttacccaaaacactacgaattttgatatgagtaaaaaattcggcacactaaacgttgct
tttggtgctgaataccgttatgaaacatacggaattaatgccggagttcctgattcttac
aatcaatatgatataaatgaaaatgtcgttacaggaacaactccagccaatattcgggtt
actgacttctttggcgctgcaaggcctggaggagctcaggtttttccgggatacagagca
gaaaatgcaaaagaagaaaatagaaacagttatgctttttacacagatttagaatgggat
attacggataagtggttattgaatggcgctgttcgttttgaaaattattctgattttgga
aatacaaccaattataaaatagcaactcgttataaattaacagataatatcaatttacgt
ggtgctttttcaactggatttagagcgccttctttacaccaaatttattacgaatcaaca
gctacgcaatttacaggaggcgttccttttgaagtaggaactttcagtaatgattctaaa
attgccgaacttctaggaattcctaaactgaaacaggaagaatctacaagttacagcgcc
ggatttacggctaaaattccttctgcgaatattaccataactgccgatgcttattacata
aaaatagacgacagagttgtacttacagatcaatttactccaacaccagttacgcagcct
ttatatgatcaggcgagtgcgaatgcggcaactttctttgccaatgccatagataccgaa
tcaaaaggaattgatgttgtgattaccaacaagcttaacttaaatgaaaatatgactctg
aaaaatgatttatcaggaactttttcgaagacccgtcaggtaggccaaattcatgcctca
ccagtccttgaagctgcaggtcaggtaaatacttatttttctgaatcatccagaatttat
ttggaagaagcgataccaagagtaaaagtaaacctgaccaacaatcttacttataaaaaa
ttagatttctttttgagaaatgtttattttggagaagttacagatccaaacgtcgcggat
gtaaatggtgatggttttgtaggcgcgactattgtaaatggcaaagccgtagaaaatgag
catcctgtttggggaggtaaaattattactgatttttctgttggttttaaaatttctgct
attaccaaagtcgtaattggtgccaataatattcttgacatttatccggacaaaaattta
gcgccacaaacggcaagaagagctactggtgttgatgcaggtggaaatgtcacgtatgcc
ccggccgcaactgctatcgacttatccaatcaaaatcaatttgtatattccagaaatgta
tctcaatttggtcaaaacggacgctttgtttttgcaagattaagttttagtttctaa
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