Flavobacterium sp. CLA17: HAV12_012505
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Entry
HAV12_012505 CDS
T11036
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
flav Flavobacterium sp. CLA17
Pathway
flav03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
flav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HAV12_012505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
flav03400
]
HAV12_012505
Enzymes [BR:
flav01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HAV12_012505
DNA repair and recombination proteins [BR:
flav03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HAV12_012505
Prokaryotic type
HAV12_012505
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QSB25197
LinkDB
All DBs
Position
complement(3069037..3069702)
Genome browser
AA seq
221 aa
AA seq
DB search
MDVKMHDSWKPVLKEEFEKPYFNELIAFVKSEYTTKVCYPKGSQIFSAFDHCHFDQVKVV
IIGQDPYHGPNQANGLCFSVNNGISFPPSLQNIFKEIETDLNKPLPKTGNLERWADQGVF
LLNATLTVRQSEAGSHQGKGWEKFTDAVIKQISAESENVVFLLWGGFAQKKAALIDAAKH
HILKSGHPSPLSANRGFWFGNKHFSQTNTFLKSKGIKEIEW
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atggacgttaaaatgcatgattcctggaagcctgttttgaaagaggaatttgaaaagcct
tatttcaatgaattaattgctttcgtaaaatcagaatacactaccaaagtttgttatcca
aaagggagtcagattttttctgcttttgaccattgtcattttgatcaggtaaaagttgtc
attatcggacaggatccctatcacggacctaatcaggccaatggattgtgtttttctgta
aataacggaatttcatttccgccctctctccagaatatttttaaagaaatcgaaacagat
ttaaataaaccattaccaaaaacaggtaatttggaacgttgggcagatcagggtgttttt
cttttaaacgctaccttaacagtccgacaatctgaagccggaagccatcagggaaaaggc
tgggaaaaatttacagatgccgttattaaacaaatttcggctgagagtgaaaatgttgtt
tttttactttggggcggttttgcccagaagaaagcagccttaattgatgctgcaaaacat
catattttaaaatcgggacatccttctcctttaagcgcgaacagaggattttggtttgga
aacaaacattttagtcagactaatactttcctgaaatcaaaagggattaaagaaattgaa
tggtaa
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