Flavobacterium sp. CLA17: HAV12_014110
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Entry
HAV12_014110 CDS
T11036
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
flav Flavobacterium sp. CLA17
Brite
KEGG Orthology (KO) [BR:
flav00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
flav02000
]
HAV12_014110
Transporters [BR:
flav02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
HAV12_014110
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
TPR_19
TPR_Sec16
Motif
Other DBs
NCBI-ProteinID:
QSB25507
UniProt:
A0A7Y3X2S7
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All DBs
Position
complement(3428816..3430342)
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AA seq
508 aa
AA seq
DB search
MKKIIIAIVVFSGLFFASSCENELDLNSQTDIETGQYWKSESDAQAGVNSIYAMFYKDGL
WARWMYFRLDLTSDEGFSNSPWTELADWTRFNYINYNFWEGNAVTWRDTYKAVFRCNQVL
AYVPNIAFQNEDDKKKVLAQAKFFRAMHYYYAAILWENIPLVLEPSTPADLPQQRNVTEV
WAQIEKDLNEAYTDLPADWTGDNTGRPDKGAAKAFLAKVYMQQHKWPEAKTALEYLITGP
GAKYSLVSNYRDNFTDVNENNNESVFEIQFGDQRKGGTGEDPNAAVSSNRGQFFAPRGIG
WSDGQARYWLVDAFKQEKNKDGNLDTRLRYTLYYPALEADFGDKTYGRNWEWGNNEAWFR
KGSRDYYRNNEDYYSQVNYRLIRYADILLRYAEVLNETGNTAGAYQYVDLVRARVNMNTL
AVSHPEIGNDHDKFLERLKTERVLELAGESVRWEDLKRWGDLDSQASVDKISLRDPDFKT
FTVGKNHRLPIPQVDVDNNPNLDQHPEY
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaataataatagcaatcgtagttttttcaggcctcttttttgcatcatcttgc
gaaaatgaactggacctgaacagccaaactgatattgaaacaggacaatattggaaaagt
gaaagtgatgctcaggcaggtgtcaattccatttacgccatgttttataaagacggctta
tgggcaagatggatgtattttcgcttagacttaacttctgacgaaggatttagtaacagc
ccgtggacagaactggccgactggaccagattcaattatatcaattataatttctgggaa
ggaaatgcagtaacgtggagagatacctacaaagctgttttcagatgtaatcaggtttta
gcttacgttcccaacattgcttttcaaaatgaagatgataaaaagaaagttttagcacag
gctaaatttttcagagcgatgcattactattatgcagccattctttgggaaaatattcca
ttggttctagagccttcaactccggctgatttaccgcaacaaagaaatgtaaccgaagtt
tgggctcagattgaaaaagatttaaacgaagcttacaccgatttaccggcagactggaca
ggagacaacaccggaagaccggataaaggtgcagcaaaagcttttctggcaaaagtatac
atgcagcagcacaaatggcctgaagcaaaaacagctttagaatatttaattaccggtccg
ggagccaaatacagtttagtttcaaactacagagacaactttacggatgtaaatgaaaac
aacaacgagtctgtatttgaaattcagtttggcgatcagagaaaaggcggaaccggtgaa
gatccaaatgctgcagtttccagcaatcgtggtcagttttttgcaccaaggggaattgga
tggtctgatggacaagcccgttattggttagtcgatgcctttaaacaggaaaaaaataaa
gatggaaatttagatacaagattgagatacactttatattatccggcattagaagccgat
tttggagacaaaacctatggaagaaactgggagtggggtaataatgaagcctggttcaga
aaaggaagccgtgattattaccgaaacaacgaagattattacagtcaggttaattaccga
ttaattcgttatgcggatattttgttacgctacgccgaagttttgaacgaaacaggcaac
acggcaggagcttaccagtatgttgatttggtgagagcacgtgtaaacatgaatacttta
gccgtttcacatcctgaaatcggaaacgatcacgataaatttctggaaagattaaaaaca
gaacgtgttttggaattagccggtgaaagtgttcgttgggaagatttaaaacgttgggga
gatttagattcccaggcttctgtcgataaaatttcgcttcgtgatcctgatttcaaaacc
tttacagtagggaaaaaccatagattgcctattccgcaggtagacgtggacaacaatccc
aacttagaccagcacccggaatattaa
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