Flavobacterium sp. CLA17: HAV12_017005
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Entry
HAV12_017005 CDS
T11036
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
Organism
flav Flavobacterium sp. CLA17
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Gene cluster
GFIT
Motif
Pfam:
LysM
ANF_receptor
Peripla_BP_6
LysM3_LYK4_5
WxLIP_HBD
Motif
Other DBs
NCBI-ProteinID:
QSB26066
UniProt:
A0A7Y3X339
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All DBs
Position
complement(4130949..4133051)
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AA seq
700 aa
AA seq
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MKYYLALLSLVFFTCSAFAQEKVVKYKVSSGETINQIAEKFKVTPYDIYSLNPDARTGLV
PNTVLLIPTGGKASAVKKEVAATKNTASGKATTHEVQPKETLFGIEKKYGISDEALKAAN
PFLVTNGLQIGQTLTIPSKGAAVKSAASTAGKAVKTAGPEKYVYHDVQAKETKYSIAKEY
KTTVEDLEKRNPEIVSSLPVGYRVTIKGTAPKTDTTTAVAANVSKAAETKKADEAVKKGT
TYMDYQVKPKETLYSLSRTFQLTQAELTELNPSLSEGVKEGMVLKVPSGFLAPAPIIAQQ
QPQQVEKQVEKPVDNSASGGIKILEKVKSETVSADPEVVELTKVRGQNERKKLALLLPFN
LAKMQSDTISSANRIKNDKFLNMTLDFYSGAMMAIDSAKVLKLPIDVSIFDSQETKSTSN
VSSLISQNKLQGANAVIGPFYQSNAESTANSLRLYNIPVISPLSKDTANPIDNLYQTIPT
NDVVKSAVFDYMRSKNGNIVAVVDKKKESVINYIKQNQKGVVFAALSETGGLDVANLKSL
LLPNRMNYVVMETGNTAMVKTTIKALLDAQKTCQVQLVILEPNSTLDTDEISFESLVKLK
LMYPSVTRESNEPAVLIFEKEYRLKNKVNPNTYATRGFDVTFDTMMRLVQGKTYQETTDL
ITTEQVDNKFQYYKKEDGGHANKGVYILYYDSDLTLKVAN
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgaaatattatttagcattattatctcttgttttttttacttgttctgcttttgcccag
gaaaaagtagttaagtataaagtttcaagtggagaaaccatcaatcagattgcagagaaa
tttaaggttacgccttatgatatttactctttaaatcctgatgcgcgaactggattagtg
cctaatacagttttactaattccaactggaggaaaagccagtgccgtaaaaaaagaagtt
gcagcaacaaaaaatactgcttcaggaaaagcaactacacatgaagtgcagccaaaagaa
acactttttggcatagagaaaaaatatggcatttctgatgaagccttaaaagctgcaaat
ccgtttttggtgaccaatggtttacaaataggtcagacgcttaccattccttcaaaagga
gcggccgtaaaaagtgctgcatcgacagccggtaaagctgttaaaactgctggtccggaa
aagtatgtatatcacgatgtacaagcaaaagaaacaaaatattcaattgcaaaagagtat
aaaacgaccgtcgaagatttagaaaaacgcaatccggaaattgtttccagtttgcctgta
ggataccgtgtaaccattaaaggaacggctcccaaaacagatacaactactgctgttgct
gccaatgtttctaaagctgccgaaactaaaaaagcagatgaagctgtaaaaaaaggaact
acgtacatggactatcaggtgaagccaaaagaaactttgtacagtttgtccagaacattt
cagttaacgcaggcagaattaacagagttgaatccgtcactttctgaaggcgtaaaagaa
ggaatggttttgaaagttccgtccggattcctggcacctgctccgattattgcccagcaa
cagccacaacaggttgaaaaacaggtagaaaaaccagttgataattcagcttcgggcggg
attaaaattcttgaaaaagtaaaatcagaaaccgtttctgcagatccggaagtggttgaa
ctgacaaaagtaagagggcaaaacgagcgtaaaaaactggctttattgctgccttttaat
ctggcaaaaatgcaatcggacaccataagttcagccaatcgaattaaaaatgataagttt
ttgaatatgacgcttgatttttattcaggggccatgatggcaattgactcggcaaaagtc
ttgaaattaccaattgatgtcagtatttttgattcgcaggaaacaaaaagtacctcaaat
gtttctagtttaatttctcagaataaattacagggagctaatgctgtgatcggcccgttt
taccaaagtaatgccgagagtacagcgaattcgcttcgtttatacaatatacctgtgatt
tctccactatcaaaagataccgctaacccaattgataacttgtatcagaccattccaaca
aatgatgtggtcaaaagtgctgtttttgattatatgcgttctaaaaacggaaacatcgtt
gcggttgtagacaagaaaaaagaatcggtgatcaattacataaaacaaaaccaaaaagga
gttgtttttgctgccttatcggaaacgggaggcttggatgttgccaatttaaaaagcctt
ttgttgcctaacagaatgaattatgtagtcatggaaaccggtaataccgccatggtgaaa
acaaccataaaagctttgttagatgcacaaaaaacctgtcaggtgcagctggtgatttta
gaaccgaacagtacgctggatacagatgaaattagttttgaaagcctggtgaaactgaaa
ttaatgtacccatcagtaactcgtgagagtaatgagccagcagtattaatatttgaaaaa
gaatacagactgaaaaataaagtgaatccaaatacgtacgctacccgtggttttgatgta
acttttgataccatgatgcgtttggttcagggaaaaacatatcaggaaacaacagattta
atcacaacagaacaggttgataataaatttcaatactacaaaaaagaagatggaggacac
gccaataaaggagtgtacatcttatattacgattcagacttaactttaaaagtagccaac
taa
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