Flavobacterium sp. CLA17: HAV12_017490
Help
Entry
HAV12_017490 CDS
T11036
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
flav Flavobacterium sp. CLA17
Brite
KEGG Orthology (KO) [BR:
flav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
flav03032
]
HAV12_017490 (gyrB)
03400 DNA repair and recombination proteins [BR:
flav03400
]
HAV12_017490 (gyrB)
Enzymes [BR:
flav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HAV12_017490 (gyrB)
DNA replication proteins [BR:
flav03032
]
Prokaryotic type
DNA Topoisomerases
HAV12_017490 (gyrB)
DNA repair and recombination proteins [BR:
flav03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HAV12_017490 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QSB26161
LinkDB
All DBs
Position
complement(4241560..4243500)
Genome browser
AA seq
646 aa
AA seq
DB search
MSEEIKKNNYSADSIQALEGMEHVRMRPSMYIGDVGVRGLHHLVYEVVDNSIDEAMGGHC
DTIGVAINEDGSVTVEDNGRGIPVDLHKKEGVSALEVVMTKIGAGGKFDKDSYKVSGGLH
GVGVSVVNALSVHMKSTVFRDGKIYEQEYERGKSLYPVKQIGETDKRGTRQTFYPDNTIF
TQTTEFSYDTLSARMRELSYLNKGITITFTDKREVDDKGEFKVEVFHSDEGLKEYIRYLD
GNREPIISHVISMDHEKGEIPVEVALIYNTSYTENIFSYVNNINTHEGGTHLQGFRSGLT
RTLKKYADASGMLDKLKFEIAGDDFREGLTAIISVKVAEPQFEGQTKTKLGNREVVSPVS
QAVGEMLENYLEENPNDARIIIQKVILAAQARHAAKKAREMVQRKTVMGGGGLPGKLSDC
SEQDPARCEVYLVEGDSAGGTAKQGRDRAFQAILPLRGKILNVEKAMHHKVFENEEIRNI
FTALGVTVGTAEDSKALNLEKLRYHKVIIMCDADVDGSHISTLILTFFFRFMKELIEEGH
VYIAAPPLYLVKKGNKKEYAWNDVQRDQANERMGGSAAIQRYKGLGEMNAEQLWETTMDP
SFRTLRQVNIDSLAEADRVFSMLMGDEVPPRREFIEKNAVYANIDA
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagaaatcaagaagaacaattattcagcagatagtattcaggcattagaagga
atggagcacgtaagaatgcgtccatcgatgtatattggagatgtaggggttcgagggcta
caccatttggtttatgaggttgttgataactctattgatgaggcgatgggaggacattgt
gatactattggtgttgcaatcaacgaagacggttcagtaacagttgaagataatggccgt
ggtattccggttgatttacataaaaaagaaggtgtttcggcacttgaggtagtaatgact
aagattggtgccggaggtaaattcgataaggattcttataaagtttccggaggtttgcac
ggtgttggggtttcagttgtaaatgccctttctgttcatatgaaatctacggtttttaga
gacggtaaaatttatgagcaggaatacgaaagaggtaaatctttatatccggtaaaacaa
attggagaaacggataaaagaggtacacgtcagactttttatcctgacaatacgatcttt
acccagactacagagttttcttatgatactttatcagcacgtatgcgtgagctttcgtac
ttaaataaaggaatcaccatcacttttaccgataagagagaagttgatgataaaggcgaa
tttaaagttgaagtttttcactcagacgaaggtctaaaagaatacatccgttatttagat
ggtaaccgtgagccaattatctctcacgttatcagcatggatcacgaaaaaggtgaaatt
ccggttgaagttgcgctgatttacaatacaagttatacagagaatattttctcttacgta
aataatatcaatacgcacgaaggaggaacgcatttacaaggttttagaagtggtttaaca
agaacccttaaaaaatacgctgatgcatccggaatgctggataaattgaaattcgaaatt
gcaggagatgatttccgtgaaggattaaccgctattatttcggtaaaagttgcagaacca
caattcgaaggacagactaaaacaaaattaggaaacagagaagtagtttctcctgtttct
caggctgttggagaaatgttagagaattatctggaagaaaatccaaatgatgcccgtatc
attatccagaaagtaattttggccgctcaggcacgtcacgctgctaaaaaagcacgtgaa
atggtacagcgtaaaacggttatgggtggcggcggattgccgggaaaactatcagattgt
tctgaacaggatcctgcaagatgtgaagtttaccttgtcgagggagattcggctggtgga
acggcaaaacaaggtcgtgatcgtgcgtttcaggcgattttacccttacgtggtaagatt
ctgaatgttgaaaaagcaatgcatcataaagtattcgaaaacgaagagattcgtaacatc
tttaccgctttaggagttaccgttggtactgcagaagacagtaaagccctaaatcttgaa
aaacttagatatcataaagtaatcattatgtgtgatgccgatgtcgatggtagtcacatt
tctactttaatattaacgttcttcttccgtttcatgaaagaactgatcgaagaaggccac
gtatatattgcagctccgcctttatacttagttaaaaaaggaaataaaaaggaatatgca
tggaatgatgtgcaacgtgatcaggcgaacgaaagaatgggtggaagtgctgctattcag
cgttataaaggtcttggagagatgaacgcggagcaattgtgggaaactaccatggatccg
agtttcagaactttacgtcaggtaaacattgacagtctggcagaagccgatagagttttc
tccatgttaatgggagatgaagttccgccacgtagagaatttattgagaaaaatgcagtt
tacgctaatatagatgcgtaa
DBGET
integrated database retrieval system
