Flavobacterium sp. CLA17: HAV12_018735
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Entry
HAV12_018735 CDS
T11036
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
flav Flavobacterium sp. CLA17
Pathway
flav03030
DNA replication
flav03430
Mismatch repair
flav03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
flav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HAV12_018735
03430 Mismatch repair
HAV12_018735
03440 Homologous recombination
HAV12_018735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
flav03032
]
HAV12_018735
03400 DNA repair and recombination proteins [BR:
flav03400
]
HAV12_018735
Enzymes [BR:
flav01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HAV12_018735
DNA replication proteins [BR:
flav03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HAV12_018735
DNA repair and recombination proteins [BR:
flav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HAV12_018735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
HHH_3
Motif
Other DBs
NCBI-ProteinID:
QSB26385
UniProt:
A0A7Y3X2B1
LinkDB
All DBs
Position
4563384..4566443
Genome browser
AA seq
1019 aa
AA seq
DB search
MYLNCHSFHSLRYGTISLDKLIGQAVAYGVKAMALTDINTVTGIYDFIKACDVAGIKPLV
GIEFRSDHQFRYIGLAKNAEGLGEMNRFLTEHNFSGEPLPVIAPQFESVFVIYTLENAPE
MLRENEFIGIRPEEISKLFTLEFKSKISKMVILQSVTFTNKREFNLHKILRAIDTNIILS
KLTAADYCKTSEKMLSLEALLPYYENYPEIIANTRYIIASCNFQYEFKTPKNKKFFTENR
QSDIALLTELAQNGLLWRYGKENAQAKARIEKELKVVDELEFSGYFLITWDIVRYSNSKG
FMHIGRGSGANSIIAYCLGITDICPLELDLYFERFLNLNRKSPPDFDIDWSWKERNTILE
YIFTKYGRDYVAFCGTNVEFKHRSIFREVGKVFGLPKEELDMLAKNPMALHETNSIVKLV
QEYAKMMIDEKYPNQRSMHACGIIISEEPITNYTPLEMPPKGFPIVLFDMHIAEEIGFEK
FDILSQRGIGHIDDSVKLIEKNRGIKLNIRDTSISKDEAVCNVHLAQGRTIGCFYIESPA
MRGLLRRLNCDNYKILVAASSIIRPGVAQSGMMKEYIFRHNNPDQFQYFHDVFKEHLGET
YGIMVYQEDVIKIAQHYGGLAAADGDILRRAMSGKGRSKEALQKVKDNFFASCAQKGHPL
GLSQEIYRQIESFAGFSFCKAHSASYAVESYQSLYLKINYPVEFMTAVINNQGGFYRTEV
YVHEARMSGGTILNPCVNKSEYQTTVYGTGIYLGFMHLQRLESKTAHLIESEREKNGDFL
SLEDFINRIPIGIESMKILIFIDAFRFTGKTKNQLLVIASLLLNNFKPENRSLMLLQEPV
KEYKLPTLERSVFEDAFDEIELLSFPVSCTVFELLQTRHRGDVMAKDLVAHHKKQVRMLA
YLISRKQVPTKKGNMYFGTWIDHEGTYFDTAHFPDCLAQYPFQGGGCYLLLGTVEVDYHF
PTITITKMSKMPFIPDPRYMDAKDQYKTQRLIREDVSPTHREPYPQGHEINLPRHRMKF
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgtatctcaactgtcattcttttcattccctgcgctacggcacgatttctcttgataaa
cttatcgggcaggctgttgcgtacggtgtaaaagcaatggccctgacggatattaatacg
gtaaccggaatctatgattttataaaagcctgtgatgtagcaggaataaaaccattggta
ggaatcgaattccgctccgatcatcaatttcgatatattgggcttgccaaaaatgctgaa
ggactgggcgaaatgaaccgttttttaacggaacataattttagtggagagcctttgcct
gtaatcgctccccaattcgaatcggtttttgtgatctatactttagaaaatgctcctgaa
atgctgcgcgaaaatgaatttatcggcattcgtccagaagaaatttccaagctttttact
ttagaatttaaaagtaaaatttctaaaatggtgattcttcaatcggtcactttcacaaac
aaaagagaatttaatctgcacaaaatccttcgggccattgataccaatattattttatca
aaactgacagcggctgattattgtaaaacttctgagaaaatgctgtccttggaagccctt
ttgccgtattatgaaaactatcctgaaattatagccaatacccggtacatcattgcttcc
tgtaattttcaatatgaatttaaaacccctaaaaacaagaagttttttactgaaaatcgt
cagagtgatattgccttattaacagaattggcgcaaaacggattgttgtggcgttatgga
aaagagaacgctcaggcaaaagcacgtatcgaaaaagagctgaaagttgttgacgaatta
gaattcagcggttattttttaattacctgggatattgtgcgatacagcaacagcaaggga
ttcatgcacattggccgtggcagcggtgccaatagtattatcgcctattgtttgggaatc
accgatatctgtccgctggaactggatttgtattttgaacgctttttgaatttaaaccga
aaaagtccgcctgattttgatatcgactggagctggaaagaacgcaatacgattttagaa
tacatctttactaaatatggccgggattatgtggctttttgcggaacgaatgtcgaattt
aaacaccgttctatttttagggaagtcggaaaagtttttggtcttcctaaagaagagctg
gacatgctggccaaaaatccgatggcattacacgaaaccaattctattgtaaaactggtt
caggaatatgcaaaaatgatgatcgacgagaaatacccgaatcagcgtagtatgcatgct
tgtggaatcataatttctgaagagccaattaccaattacacgcctttggaaatgcctcca
aaaggttttcctattgtgctttttgatatgcatattgccgaagaaattggttttgaaaaa
ttcgatattttaagtcagcgtggtatcgggcatattgacgacagtgtgaaattgattgag
aaaaacaggggtattaaacttaatattcgggatacttcgatttccaaagatgaagcggtg
tgcaatgttcatttggcacaaggcagaactattggctgtttttatatcgaaagtccggcc
atgcgcggattgttacgccggcttaattgtgataattataaaattctggtggcggcttct
tctattattcgtcccggcgtggcgcaatcgggaatgatgaaagaatatatttttcgtcat
aacaatccggatcagtttcaatattttcatgatgtcttcaaggaacatctgggcgaaacg
tatggtattatggtgtatcaggaagatgtgattaaaattgcccagcattacggaggactt
gcagccgccgatggtgatattctgcgtcgtgcgatgtcgggaaaagggcgttctaaagag
gcgcttcaaaaagttaaagataatttctttgcttcatgtgctcaaaaaggacatccgtta
ggacttagtcaggaaatttaccgccagatcgaatcgtttgccggattttcattttgcaaa
gcacactcggcttcatatgctgtggagagttatcagagtttatatctgaagattaattat
cctgtggaatttatgacagcggtaatcaataatcagggtggtttttacagaaccgaagtg
tatgtgcacgaagcccgaatgtccggcggtacgattcttaatccgtgtgtaaacaaaagt
gaatatcaaaccactgtatatggtaccggtatttatctcggttttatgcacctgcagcgt
ttagaatcgaaaaccgctcatttaatcgaatcagaacgggagaaaaatggtgattttctt
tctttggaagatttcattaatcgtattccgattgggattgaaagcatgaaaattttgatt
tttatagacgcttttcgttttacaggaaaaactaaaaatcaacttttagttattgcgagt
ttacttttaaataatttcaaacctgaaaacagaagtctgatgctattacaggaacccgtt
aaggaatataaactcccaactttggaacgttctgtatttgaagatgcttttgatgaaatt
gaacttttaagttttcctgtttcctgtaccgtttttgagcttttgcaaaccaggcatcgc
ggcgacgttatggcaaaagatttagtcgcccatcataaaaaacaagttcgtatgctggcc
tatctgatttcgagaaaacaagttccaaccaaaaaaggaaacatgtatttcggaacctgg
atcgatcatgaaggtacttattttgatacggcacattttcctgattgcctggcgcagtat
ccttttcagggcggaggctgttatttgcttttaggaactgtggaagtcgattatcacttt
ccgacaatcactattaccaagatgtctaaaatgccttttattcctgatcctcggtatatg
gatgctaaagatcagtataaaacacagcggttaatcagggaagatgttagccctacgcat
cgggaaccttatccgcagggacacgaaattaatctgcccagacatcgaatgaaattttag
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