Flavobacterium sp. CLA17: HAV12_019655
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Entry
HAV12_019655 CDS
T11036
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
flav Flavobacterium sp. CLA17
Brite
KEGG Orthology (KO) [BR:
flav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
flav03032
]
HAV12_019655 (topA)
03400 DNA repair and recombination proteins [BR:
flav03400
]
HAV12_019655 (topA)
Enzymes [BR:
flav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HAV12_019655 (topA)
DNA replication proteins [BR:
flav03032
]
Prokaryotic type
DNA Topoisomerases
HAV12_019655 (topA)
DNA repair and recombination proteins [BR:
flav03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HAV12_019655 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
DUF4294
Poly_export
HC2
Motif
Other DBs
NCBI-ProteinID:
QSB26553
UniProt:
A0A7Y3TL78
LinkDB
All DBs
Position
complement(4793220..4795736)
Genome browser
AA seq
838 aa
AA seq
DB search
MAKNLVIVESPAKAKTIEKFLGSDFQVESSYGHIADLPSKEIGVDVENGFKPKYEVSPDK
KALVSKLKALSKNAEMVWLASDEDREGEAISWHLAEELKLDTKKTKRIVFHEITKSAILK
AIENPREIDYNLVNAQQARRVLDRLVGYELSPVLWRKIKGGLSAGRVQSVSVRLIVERER
EIQNFNAVASYSVVAEFVNEAGKAFKAKLPKNFTTKKEAEDFLTQNIGSIYKVADLETKP
TKKSPTAPFTTSTLQQEAARKLYLPVGITMQLAQRLYEAGLITYMRTDSVNLSKDAMDAA
EAEIIKSYGKEFSKPRTFATKSKGAQEAHEAIRPTDMSRHTVNIDRDQARLYDLIWKRTL
ASQMSDAQLERTNVKIEANNHGEIFTASGEVLLFEGFLKVYLEGHDDDEEEQEGMLPALK
VNEKLANNYITATERYSRPPARYTEASLVKKLEELGIGRPSTYAPTISTIINRNYVEKGT
LEGQERNYTQLTLQNSKVGEKLLKENTGSDKGKLVPTDIGTIVTDFLVKNFGNILDYNFT
AKVEQDFDEIAEGNIDWATMMQEFYDKFHPNVKEVEANAERESGERILGKDADGRQVSVR
LGKFGPMAQIGEADDEDKKFASLMSDQNIGNITLEDALNLFLLPKSLGEYKGEDVEVSNG
RYGPYIRHGSAFISLPKGEDPLGVSKERAQELIDEKALADAPIAVYKGEGVQKGVGRFGP
FIKWNGLFVNVSKKYNFDNLSQSDVEELIEDKLQKNIDKVLHNWEDEGILVEKARWGRSV
ITKGKIKIELSKDVDATKLTLEEVQEMIAKKTPAKKTPAKKATTTKKAPAKKTAAKKK
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaatttagtaatagtggaatcacctgcaaaggcgaaaacgatagagaagttt
ctaggaagtgattttcaggttgagtcaagttatggacacatagccgatttaccgtcaaaa
gaaataggagtagatgtagagaatggatttaaacctaaatatgaagtttctccggataaa
aaagccctggtaagtaaactgaaagcactatctaaaaatgccgaaatggtttggctggca
agtgatgaggaccgcgagggggaagctatttcatggcatcttgcggaagaattaaaactg
gatactaaaaaaaccaaaagaattgtttttcacgaaatcacgaaaagtgccattcttaaa
gcaatcgaaaatccaagagaaatcgattataatttggtaaatgcccaacaggcgcgtcgt
gttttagaccgtttagtgggttatgaattatcacctgttttatggagaaagattaaaggc
ggtttgtctgctggccgtgtgcaatctgtttctgttcgtttaattgtggaaagagaacgt
gaaattcagaattttaatgcagttgcgagttattccgttgtggcagaatttgttaatgaa
gccggaaaagcattcaaagccaaattaccaaaaaactttacgactaaaaaagaggccgaa
gatttcttaacacaaaatatcggttctatatataaggtagcggatttagaaaccaagcct
accaaaaaatctccaacagcaccttttactacgtcgactttgcaacaggaagcggccaga
aaattgtatttgcccgttggaatcacgatgcagttagcacaacgtttatatgaagccgga
cttatcacttatatgagaacggatagtgtaaacctttctaaagatgctatggatgctgca
gaagctgaaattataaaatcatacggaaaagaattctctaagccccgaacttttgctact
aaaagtaaaggggcacaagaggctcacgaagcaattcgtccgacagacatgtctcgtcac
actgtaaatattgatcgtgatcaggcacgtttgtacgatttgatctggaaaagaacactg
gcatctcaaatgagtgatgcacaactggaaagaacaaacgtaaaaattgaagctaataat
cacggtgaaatctttacagcttccggagaagttttactttttgaaggtttcttaaaagta
tacttagaaggacatgatgatgatgaggaagagcaggaaggtatgcttccggccttaaaa
gtaaatgaaaaattagccaataattatattacggctaccgaaagatattcaagaccaccg
gcacgttatacagaagcttcgctggtaaaaaagttagaagaattaggaattggccgtccg
tctacgtatgcaccaactatttcgactatcatcaacagaaattatgttgaaaaaggaact
cttgaaggtcaggaacgtaactatacgcaacttactttgcaaaatagtaaagttggagaa
aagctgttaaaagaaaatacaggttctgataaaggaaaattggttccaacggatatcggt
actatcgttacagatttccttgttaagaatttcggaaacatccttgattataattttacg
gcaaaagtagaacaggattttgatgaaattgcggaaggaaatattgactgggcaaccatg
atgcaggaattctacgataaattccacccgaatgtaaaagaagttgaggctaatgcggaa
cgcgaaagcggtgaaagaattttagggaaggatgctgacggaagacaggtttctgttcgt
ttaggaaaattcgggccaatggctcaaattggagaagcagatgatgaagataaaaaattc
gccagcttaatgtcggatcagaatattggaaacatcaccttagaagatgcacttaatttg
tttttattgccgaagagcttaggggaatataaaggagaggacgtagaggtaagtaatggt
cgttacggcccttatatacgtcacggaagtgcttttatttctttgccaaaaggagaagat
cctttgggtgtctctaaagaaagagcgcaggaactgattgacgaaaaagcgcttgcagat
gcgccaatcgctgtttataaaggagagggagttcagaaaggtgtggggcgttttggtcca
ttcatcaaatggaacggcctttttgtaaacgtaagtaaaaaatacaattttgataattta
tcccaatctgatgttgaagaactgattgaggataaattgcagaaaaatatagataaagta
ctccataattgggaggatgaagggattttggttgaaaaagcacgttggggccgctcggtg
attacaaaaggtaaaatcaaaattgaactgagtaaagatgttgatgctacaaagctgaca
ttggaagaagttcaggaaatgatcgccaaaaaaacaccggctaagaaaacaccagcgaaa
aaagcaacaacaactaaaaaagccccagctaaaaaaacagctgctaaaaagaaataa
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