Flavobacterium sp. CLA17: HAV12_019700
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Entry
HAV12_019700 CDS
T11036
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
flav Flavobacterium sp. CLA17
Pathway
flav03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
flav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HAV12_019700 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
flav03019
]
HAV12_019700 (groL)
03110 Chaperones and folding catalysts [BR:
flav03110
]
HAV12_019700 (groL)
03029 Mitochondrial biogenesis [BR:
flav03029
]
HAV12_019700 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
flav04147
]
HAV12_019700 (groL)
Enzymes [BR:
flav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
HAV12_019700 (groL)
Messenger RNA biogenesis [BR:
flav03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
HAV12_019700 (groL)
Chaperones and folding catalysts [BR:
flav03110
]
Heat shock proteins
HSP60 / Chaperonin
HAV12_019700 (groL)
Mitochondrial biogenesis [BR:
flav03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
HAV12_019700 (groL)
Exosome [BR:
flav04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HAV12_019700 (groL)
Exosomal proteins of other body fluids (saliva and urine)
HAV12_019700 (groL)
Exosomal proteins of breast cancer cells
HAV12_019700 (groL)
Exosomal proteins of colorectal cancer cells
HAV12_019700 (groL)
Exosomal proteins of bladder cancer cells
HAV12_019700 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Pho88
NNH2
Motif
Other DBs
NCBI-ProteinID:
QSB26562
UniProt:
A0A7Y3X3X7
LinkDB
All DBs
Position
4803195..4804823
Genome browser
AA seq
542 aa
AA seq
DB search
MAKDIKFDIEARDGLKRGVDALANAVKVTLGPKGRNVIIGKSFGGPTVTKDGVSVAKEIE
LKDPLENMGAQMVKEVASKTNDLAGDGTTTATVLAQAIVKEGLKNVAAGANPMDLKRGID
KAVEAIVADLAKQAKVVGSDSDKIKQIASISANNDEVIGDLIATAFAKVGKEGVITVEEA
KGTDTYVDVVEGMQFDRGYLSPYFVTNPEKMEVELDSPYILLYDKKVSSLKELLPVLEPV
AQSGKPLLIIAEDVDGEALSTLVVNKLRGALKIAAVKAPGFGDRRKAMLEDIAILTGGTV
ISEERGYTLENTTIEMLGTAKRVSIDKDNTTIVSGAGEADIIKNRVNQIKGQMETTTSDY
DKEKLQERLAKLAGGVAVLYVGAASEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALL
RAKAALADLKADNADEATGIQIVARAVESPLRTIVENAGLEGSVVVAKVGEGSGDFGYNA
KTDEYVDMLKAGIIDPKKVTRVALENAASVAGMILTTECALIDIKEENGGGMPMGGGMPG
MM
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagatataaaatttgatattgaagcacgtgacggattaaaacgtggtgttgat
gcattggcaaatgctgtaaaagtaactcttggaccaaaaggtcgtaacgtaattatcgga
aaatcatttggtggaccaacagttaccaaagatggagtttcggttgcaaaagaaatcgaa
ttgaaagacccattagaaaatatgggtgcacaaatggtgaaggaagttgcttctaaaacc
aatgacttagcaggagacggaactacaactgctacagttttggctcaggcgattgtaaaa
gaaggtttgaaaaacgttgctgcaggagcaaatccaatggacttgaaacgcggtatcgat
aaagcagttgaagctatcgttgctgatcttgcaaaacaagctaaagttgttggaagtgat
tctgataaaatcaaacaaattgcttctatctctgcaaacaatgacgaagtaattggtgat
ttgatcgctactgcttttgctaaagtgggtaaagaaggtgtaatcactgttgaagaagct
aaaggaacagatacctacgttgatgttgtggaaggaatgcagtttgacagaggatacctt
tctccttacttcgttacaaatccggagaaaatggaagttgaattagactctccatacatc
ttattatacgacaaaaaagtatcttctttaaaagaattactaccagttttagagccggtt
gcacaatcaggaaaaccattattgattattgctgaggatgttgacggagaagctctttct
actcttgttgtaaataaattaagaggtgctcttaaaattgctgccgtaaaagctcctggt
tttggagacagaagaaaagcaatgttagaggatatcgccatcttaacgggtggtactgta
atttctgaagaaagaggatatactttagaaaacactacaattgaaatgttaggaaccgca
aaaagagtttctatcgataaagacaacactacaattgtaagtggtgctggtgaagctgat
atcatcaaaaacagagtaaaccaaattaaaggtcagatggaaaccacaacatctgattat
gataaagaaaaattgcaggagcgtttggctaaattagccggtggtgttgctgttctttat
gttggtgctgcttctgaagttgaaatgaaagagaaaaaagacagagttgacgatgcttta
cacgcaactcgtgctgctgttgaagaaggaatcgttgctggtggtggtgtagcgctttta
agagctaaagccgcattagcagatcttaaagcggacaacgctgacgaggcaacaggaatt
cagattgtagcccgtgctgttgaatctccgttaagaactattgttgaaaatgcaggtctt
gaaggttccgtagtggtagcaaaagtaggtgaaggttctggtgattttggatacaatgcc
aaaactgacgaatatgtagacatgcttaaagcaggaattatcgatcctaaaaaagtaact
cgtgtagcgttagaaaatgctgcctctgttgcgggaatgatcttaactactgagtgtgcc
ctaattgatattaaagaagaaaacggaggcggaatgccaatgggtggcggtatgccggga
atgatgtaa
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