Flavobacterium sp. CLA17: HAV12_020210
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Entry
HAV12_020210 CDS
T11036
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K21686
XRE family transcriptional regulator, fatty acid utilization regulator
Organism
flav Flavobacterium sp. CLA17
Brite
KEGG Orthology (KO) [BR:
flav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
flav03000
]
HAV12_020210
Transcription factors [BR:
flav03000
]
Prokaryotic type
Helix-turn-helix
XRE family
HAV12_020210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_3
HTH_19
HTH_31
ScfRs
Peptidase_M78
HTH_26
HTH_25
Motif
Other DBs
NCBI-ProteinID:
QSB26659
LinkDB
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Position
4911367..4912848
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AA seq
493 aa
AA seq
DB search
MDIEKDYIKLIFGLKLKQVRTQKNLSLFGLAKLTNLSKSYLNEIEKGKKYPKTDKILLLC
EHLDISYDQMVSLKLDNNLAPIGEILKSGILKEIPLELFGIQEADLIDIIANAPAKVNAF
ISTIIEIAQHYNLSRESFFLAALRSYQEAHSNYFEDLEDKVIAFSKSFQINLDSKITIEE
LEAILTEEFDYTIKEIAFTDQEALEDLRSIYVPKSRTLLLSTEIDHPQKAFILAKEIAYN
YLKISDRLLTFSWIKFENFDQVLHNFYASYFAGALLLPRQLVVGKINDFLHNEKPNPEEF
VALIESFEVSPESFYQRLTNLLPKDFHLKNLFFLRMSHRIGSDVYQIKKELHITNQQEPH
ANETNEHYCRRWVSVKTIDEAIRQNKPHFFDAQISSYIHSGNEYLVFSSATKDPFVENNI
RSISVGILITPTMKKKFKFIDAKPLIKRIVGVTCETCSVKDCLERAAPPIALEMKKRHDN
TDFVVQQFINQYS
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggatatcgaaaaagactatataaagctgatctttgggctaaaactcaagcaagtcaga
acacaaaaaaatctttctctttttggcttggccaaattgacaaatctttcaaaatcgtac
ttaaacgaaattgaaaagggtaaaaaatatcccaaaacagataaaattttgcttttgtgc
gagcatttggatattagttacgaccaaatggtttctttaaaactcgataataaccttgcc
ccgattggagaaattttaaaatccggaattttaaaagagattccgttagaacttttcggc
attcaggaagcggatttaatagacattattgccaatgctcccgccaaagtcaatgccttt
atcagtaccataattgaaattgcacagcattacaatcttagcagggaaagtttctttctg
gctgccttaagatcttaccaggaagcccacagtaattattttgaagatcttgaagataaa
gtgattgctttttcaaaatcatttcagattaatttggattctaaaatcacgattgaagaa
ctggaggccattcttacagaggaatttgattacacgataaaagaaatcgcttttacagat
caggaagctttggaagatttacgatctatttatgttccgaaaagcaggactttattgctt
tcaacagaaattgaccatccgcagaaagcttttattctcgccaaagaaatcgcttacaat
tatttaaaaatatccgatcgtttgttgacttttagctggataaaattcgaaaacttcgat
caggtcctgcataatttttacgcttcttattttgccggcgctttattattaccaagacaa
ttggtagtgggcaaaatcaatgacttcttacataatgaaaaaccaaatccggaagaattt
gtcgcattgatcgaaagtttcgaagtttctccggaatctttctaccagagactgaccaat
ctattgcctaaagattttcatttgaaaaacttattctttttaagaatgtctcacagaatt
ggatctgatgtgtatcagatcaaaaaagaattacacatcaccaatcaacaggaaccgcat
gcaaatgagaccaatgagcattactgcagaagatgggtttcagtaaaaaccatagatgaa
gccatcaggcaaaacaaaccccacttttttgatgctcagatttccagttatatacatagt
ggaaatgaatatctggttttttcatcggctacaaaagatccttttgtagaaaacaacatt
cgcagcatttctgtcggaattttgattaccccaacaatgaaaaagaaatttaaattcatt
gatgcaaaacctcttatcaaacgaattgttggtgtcacgtgcgaaacctgctccgtgaaa
gattgcttagaaagagctgctcctcctattgccctggaaatgaaaaaacgccatgacaac
acggattttgttgttcagcagttcattaatcaatatagttag
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