Flavobacterium sp. CLA17: HAV12_020640
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Entry
HAV12_020640 CDS
T11036
Symbol
ruvA
Name
(GenBank) Holliday junction branch migration protein RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
flav Flavobacterium sp. CLA17
Pathway
flav03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
flav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HAV12_020640 (ruvA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
flav03400
]
HAV12_020640 (ruvA)
DNA repair and recombination proteins [BR:
flav03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HAV12_020640 (ruvA)
RecFOR pathway proteins
HAV12_020640 (ruvA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvA_N
HHH_5
RuvA_C
HHH
HHH_2
Ribosomal_S13
RecR_HhH
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
QSB26740
LinkDB
All DBs
Position
complement(5003657..5004238)
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AA seq
193 aa
AA seq
DB search
MIAHLQGKLVEKNPTEVVIDCGGVGYHINISLHTFSLLPKTDFIKLYTHLLIKEDAHTLF
GFVEKSEREIFRMLLSVSGIGANIARTMLSSIEPRQIINAIASGDVVAIQSIKGIGNKTA
QRVILDLKEKVLKLYDLDEVSVVQNNTNRDEALSALEVLGFVRKTSEKVVEKIVKEDPEA
TVETIIKKALKSL
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgatagcacatttgcaggggaaattagtagaaaaaaaccccacagaagttgtaattgat
tgcgggggagtgggttaccatatcaatatatccctgcacaccttttcgttacttcccaaa
acagattttataaaattgtatacgcatcttctaattaaagaagatgcgcatactttattt
ggttttgtagaaaaatcagaaagagaaatattcagaatgcttctgtcggtttccggcata
ggagccaacattgcgagaacaatgttatcgtctatagaaccaagacaaattataaacgcc
attgcctctggagatgtagtcgctattcagtctataaaaggaataggaaacaaaacagca
cagagagttatacttgatttaaaagaaaaagtgttaaagttatacgatttagatgaagtt
tcagtagttcagaacaatacaaaccgagatgaagcgttatctgctttggaggttttaggt
tttgttcgtaaaacgtcagaaaaagtagtcgaaaaaatcgtaaaagaagatccggaggca
actgtcgaaacgatcattaaaaaagcattaaaaagcttataa
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