Flagellimonas sp. CMM7: LV704_03780
Help
Entry
LV704_03780 CDS
T08590
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
flb
Flagellimonas sp. CMM7
Pathway
flb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
flb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LV704_03780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
flb03019
]
LV704_03780
03016 Transfer RNA biogenesis [BR:
flb03016
]
LV704_03780
Enzymes [BR:
flb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
LV704_03780
Messenger RNA biogenesis [BR:
flb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LV704_03780
Transfer RNA biogenesis [BR:
flb03016
]
Prokaryotic type
tRNA degradation factors
LV704_03780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
KH-I_KHDC4-BBP
S1_2
Motif
Other DBs
NCBI-ProteinID:
UII80639
LinkDB
All DBs
Position
823358..825595
Genome browser
AA seq
745 aa
AA seq
DB search
MIPKTFREVIDLGDGREISIETGKLAKQAHGSVVVQSGKCMLLCTVVSNYKQSDVDFLPL
TVDYREKFAAAGRYPGGFFKREARPSDGEVLTMRLVDRVLRPLFPKDYHSETQVMIQLMS
HDDDVMPDAMAGLAASAAIQLSDFPFECAISEARVGRVNGEFVINPTRAQLEESDIDMMI
GASADSVMMVEGEMDEISEEEMTEAIKFAHEAIKVQCAAQLKLAEAFGKKETREYEPERE
DVDLAQKIHDMAYDKVYAVAKAGSAKHERSAAFAEIKEEIKATFSEEELEDIGGLVSKYY
SKAEKAAVRDLTLNEGLRLDGRKTDEIRPIWCEVDYLPSTHGSAIFTRGETQALATVTLG
TSREANQIDMPSFEGEERFYLHYNFPPFSTGEARPIRGTSRREVGHGNLAQRALKGMVPE
DCPYTVRVVSEVLESNGSSSMATVCSGTMALMDAGVQLKKPVSGIAMGLISDADSGKYAV
LSDILGDEDHLGDMDFKVTGTSDGITACQMDIKVKGLSYEILVNALNQARDGRLHILGKL
TDTIAAPAEDVKPHSPKMVTRRIPNEFIGALIGPGGKVIQEMQKETETTIVINEDPVTEE
GIVEILGVGNEGIDAVLAKIDSILFKPEVGSVYEVKVIKMLDFGAVVEYMDAPGNEVLLH
VSELAWERTENVSDVVNMGDVFDVKYFGLDPRTRKEKVSRKALLPKPEGYVERPPRNDRG
DRRGGNDRRGGDRRGGDRDRKPRRD
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgattccaaaaacttttagagaggtcattgaccttggtgacggtagagagatttctatt
gaaaccggaaaattggcaaaacaggcccacggttctgttgttgtccagtcaggcaagtgt
atgttattatgtacagttgtttcaaattacaaacaaagcgatgttgactttttgcctctt
acggtagattatcgcgaaaaatttgcggccgctgggcgttacccaggtggtttcttcaaa
cgtgaagcccgccctagtgatggtgaggttttaaccatgcgtttggtagatagggtttta
cgaccattgttcccaaaagattaccacagtgagacacaagtgatgattcagttgatgtct
catgatgacgatgttatgcccgacgctatggcaggattagctgcttcggctgctattcaa
ttatcagatttcccttttgaatgtgctatttctgaagctagagttggtcgtgtaaatggt
gaattcgtcatcaacccaactagagcacagttagaagaatctgacattgacatgatgatt
ggtgcctctgctgattctgtaatgatggttgagggagagatggatgagatttctgaggaa
gaaatgactgaagctattaagtttgcgcacgaggctattaaagtacaatgtgctgctcag
ttgaaattagctgaagcatttggtaaaaaagaaactcgtgagtatgagccagaacgtgaa
gatgttgatttagctcaaaaaattcacgatatggcatacgacaaagtatatgctgtagca
aaagcaggttctgccaaacatgaaagaagtgctgcatttgcagaaattaaagaagaaata
aaagcgactttctctgaagaagagttagaagatattggaggtttagtctctaaatattac
agtaaagctgaaaaagccgctgttagagatttaactttaaacgaaggtttacgtttagat
ggtcgtaagacagatgaaattagacctatttggtgtgaggttgattatttgccatcaact
catggttctgcaatctttactcgtggagaaactcaggcattagcaacggttactttagga
acatctagagaagcaaatcaaatagatatgccttcttttgaaggtgaagaacgtttctat
ttacactataacttccctcctttctcaaccggtgaagcaagacctattagaggaacttct
cgtcgtgaggtgggacatggtaacttagcacaacgtgctttaaaaggtatggttccagaa
gactgtccttatacagtacgtgttgtaagtgaagtattggaatctaacggttcgtcttct
atggcaacagtttgttctggtactatggcacttatggatgctggtgttcaattaaaaaaa
cctgtttccggtattgctatgggattaatttctgatgccgattctggaaagtacgcagtt
ttatcagatattttaggtgatgaagatcacttaggagacatggactttaaagttactggt
acttccgatggtattacggcttgccaaatggatattaaagtaaaaggattgtcttacgaa
attcttgtaaatgctctaaatcaagctcgtgacggtcgtttacatattttaggtaaatta
accgatacgatagctgctccagcggaagatgtgaaaccacactctccaaaaatggttact
agaagaattcctaacgaatttattggtgcattaattggtcctggtggaaaagtaatacag
gaaatgcaaaaagaaacggaaactaccattgtaattaatgaagatccggtaacagaagaa
ggtatcgtagaaattttaggtgttggcaatgaaggtattgatgctgttttagctaaaata
gattctatattgtttaaacctgaagttggaagcgtttacgaggtaaaagtaatcaagatg
cttgattttggtgcggttgtagaatatatggacgcacctggcaatgaagtattattacac
gtaagtgaactagcttgggaacgtacagaaaacgtttctgatgtagtaaacatgggagat
gtctttgatgtaaaatactttggtctggaccctaggaccagaaaagagaaggtttctaga
aaagctttacttccaaaacctgaaggatatgttgaaagaccaccaagaaacgatcgtggt
gaccgaagaggcggcaatgaccgtagaggtggcgaccgcagaggtggcgatagagataga
aaaccccgaagggactaa
DBGET
integrated database retrieval system
