Flagellimonas sp. CMM7: LV704_12730
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Entry
LV704_12730 CDS
T08590
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
flb
Flagellimonas sp. CMM7
Pathway
flb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
flb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LV704_12730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
flb03021
]
LV704_12730
03400 DNA repair and recombination proteins [BR:
flb03400
]
LV704_12730
Enzymes [BR:
flb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LV704_12730
Transcription machinery [BR:
flb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LV704_12730
DNA repair and recombination proteins [BR:
flb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LV704_12730
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
UII78526
LinkDB
All DBs
Position
2795132..2796124
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AA seq
330 aa
AA seq
DB search
MALLNFQKPDKVIMIDSTDFEGKFEFRPLEPGYGLTVGNALRRVLLSSLEGFAITSVRID
GVEHEFSVIPGVVEDVTEMILNLKQVRFKRQIDDVESETVSVSVSGKEQLTAGDFQKFIS
GYQVLNPDLVICNMDPKVSINLEVIIEKGRGYVPAEENKKSNAPLGSIAVDSVYTPVKNV
KYSIENFRVEQKTDYEKLVFEIVTDGSIHPKDALTEAAKVLIHHFMLFSDERITLEADEI
AQTETYDEESLHMRQLLKTKLVDMDLSVRALNCLKAAEVDTLGDLVSFNKNDLMKFRNFG
KKSLTELEELVINKGLQFGMDLSKYKLDKD
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcattactaaattttcagaagcccgataaagttataatgatagattcaaccgatttc
gaagggaaatttgaatttcgccctttggaacctggttacggattaacagttggaaatgcg
ttaagaagagttcttctttcctctttggaaggttttgcaatcacttctgttcgtattgat
ggagttgaacatgagttttctgttattcctggcgttgttgaagacgttacagaaatgata
ttgaaccttaagcaagttcgtttcaaaagacagattgatgatgttgagagcgaaacagtt
tctgtttccgttagtggaaaagaacaattgactgctggtgattttcaaaaattcatctct
ggataccaagtactaaatccagatttagttatctgtaacatggatcctaaagtaagtatt
aacctagaggttattattgaaaaaggacgtggttacgttcctgctgaggaaaacaaaaaa
tccaatgcacctttgggtagtattgcggttgattctgtttacactccggtaaagaacgta
aagtacagtattgaaaactttagggttgagcaaaaaaccgattacgaaaaattggttttt
gaaatcgtaacagatggttctatccaccctaaagatgcattgactgaagctgctaaagtt
ttgattcaccacttcatgttattctctgatgagcgtattacattagaagctgatgaaatt
gcacaaactgaaacatatgatgaagaatctttacatatgcgtcagttgttgaaaaccaaa
ttggtagacatggacttgtccgttagggctttaaactgtcttaaagctgctgaagttgat
actttgggagatttggtttctttcaacaagaatgatttaatgaagttcagaaactttggt
aaaaaatcattgaccgaattggaagagttggtaatcaacaaaggccttcaatttggaatg
gatttatccaaatataaattggacaaagattaa
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