Flagellimonas sp. CMM7: LV704_13355
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Entry
LV704_13355 CDS
T08590
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
flb
Flagellimonas sp. CMM7
Brite
KEGG Orthology (KO) [BR:
flb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
flb03032
]
LV704_13355 (gyrB)
03400 DNA repair and recombination proteins [BR:
flb03400
]
LV704_13355 (gyrB)
Enzymes [BR:
flb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LV704_13355 (gyrB)
DNA replication proteins [BR:
flb03032
]
Prokaryotic type
DNA Topoisomerases
LV704_13355 (gyrB)
DNA repair and recombination proteins [BR:
flb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LV704_13355 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Toprim_4
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
UII78650
LinkDB
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Position
2935348..2937288
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AA seq
646 aa
AA seq
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MSEEAKKNQYSADSIQALEGMEHVRMRPSMYIGDVGTRGLHHLVYEVVDNSIDEAMGGYC
DTINVTINEDNSITTKDNGRGIPVGLHKKEGVSALEVVMTKIGAGGKFDKDSYKVSGGLH
GVGVSCVNALSSHLKATVYREGKIWEQEYERGKTSYPVKSIGESKETGTVVTFVPDNTIF
TQTTEYSYDTLANRMRELAYLNKGITITLTDKRNKDEKGEFVSETFHSKEGLKEFIRFLD
SNREPLIQSVISMEGEKNGIPVEVAMVYNTGFTENLHSYVNNINTHEGGTHLSGFRRGLT
STLKKYADSSGMLDKLKFEIAGDDFREGLTAIVSVKVGEPQFEGQTKTKLGNREVTSAVS
QAVSEMLTDYLEEHPDDAKVIVQKVVLAATARHAAAKAREMVQRKTVMSIGGLPGKLSDC
SDQDPANCEVFLVEGDSAGGTAKQGRDRKFQAILPLRGKILNVEKAMQHKVFENEEIKNI
YTALGVTIGTEDDSKALNLEKLRYHKVVIMCDADVDGSHIETLILTFFFRYMRELIEGGH
VYIATPPLYLVKKGTKRRYAWNDEERDEIVESMNGAAGIQRYKGLGEMNAEQLWDTTMNP
DFRTLRQVTIDNATETDRIFSMLMGDEVPPRREFIEKNAVYANIDV
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagaagctaaaaaaaaccaatattcggcagatagcattcaggccctagagggg
atggagcatgtgcgcatgcgaccttctatgtatattggagatgtaggtacaagaggattg
catcatttggtatatgaagtagtggataattccattgatgaggccatgggtggttattgt
gatactattaatgttactatcaatgaagataattccataactacaaaagacaacgggcga
ggtattcccgtaggccttcataagaaagaaggggtttcggcattggaagttgtaatgaca
aagattggtgctggtggtaaatttgataaagattcctataaagtttctggtggtctccat
ggggtaggggtttcttgtgtaaatgcactttctagccatttaaaagcaacagtttacaga
gagggtaaaatttgggagcaagaatacgaaagaggtaaaacatcataccctgttaaaagt
ataggtgagagcaaagaaacaggtactgttgtaacgtttgttcctgataataccattttt
acccagaccacagagtacagttatgataccttggcaaatagaatgcgtgagctggcctat
ttgaataagggtattacaattacgttaaccgataagcgcaacaaggatgagaagggtgaa
tttgtctccgagacatttcattccaaagaagggctaaaagaatttatcagatttttagat
agtaacagagaaccgttgatacaaagcgtcatctctatggaaggtgagaagaatggaatt
ccggttgaagtggccatggtctacaatacagggtttacggaaaaccttcattcttacgta
aacaatattaatacccatgagggagggacccatttgtcaggttttagaagaggattaaca
tccactttaaagaaatatgcagatagttctggaatgctggataagctaaaatttgaaatt
gctggagatgatttcagagaaggattaacagcaattgtctcagttaaggtgggtgaacca
cagtttgaaggccagactaagactaaactaggtaacagagaggttacgagtgcagtaagt
caggccgtttcagaaatgcttacggattatttggaagaacacccagacgacgcaaaagta
attgttcaaaaagtggttttagcagctacggcaagacacgcagctgcaaaggctagggaa
atggtccaacgtaaaacggtaatgagtattggaggtcttccaggaaaactatcagattgt
tcagatcaagatccagccaattgcgaagtgttcttggtagagggtgactctgcaggtgga
acagccaaacaaggaagagatagaaagtttcaggcaatattgccgttacgaggtaaaatc
ttgaacgttgagaaagccatgcagcataaggtttttgaaaatgaggagattaaaaatatc
tacacggcactcggtgttaccataggaaccgaagatgatagtaaagcgttgaatctcgaa
aaattacgctaccacaaagtggtaatcatgtgtgatgcggatgtggatggtagtcacatt
gagacgttgattcttacattcttcttcagatatatgcgtgaattgatagaaggaggacat
gtttacatcgctaccccgccattatatctggtaaaaaaaggtactaaaagaaggtatgct
tggaatgatgaggagcgtgatgagattgtagagtctatgaatggagcagctggtatacaa
cgttacaaaggtcttggtgaaatgaatgcagaacaattgtgggacactacaatgaatcct
gattttagaactttacgacaagtcaccatagataatgcaacagaaactgaccgtattttc
tccatgttaatgggggatgaggtgcctccaagacgggaatttatagagaaaaatgctgtc
tatgcgaacatagatgtatag
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