Flagellimonas sp. CMM7: LV704_17315
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Entry
LV704_17315 CDS
T08590
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
flb
Flagellimonas sp. CMM7
Pathway
flb03030
DNA replication
flb03430
Mismatch repair
flb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
flb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LV704_17315 (holA)
03430 Mismatch repair
LV704_17315 (holA)
03440 Homologous recombination
LV704_17315 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
flb03032
]
LV704_17315 (holA)
03400 DNA repair and recombination proteins [BR:
flb03400
]
LV704_17315 (holA)
Enzymes [BR:
flb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LV704_17315 (holA)
DNA replication proteins [BR:
flb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LV704_17315 (holA)
DNA repair and recombination proteins [BR:
flb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LV704_17315 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
HP_1247_M
DNA_pol3_delta2
Resolvase
Motif
Other DBs
NCBI-ProteinID:
UII79406
LinkDB
All DBs
Position
3836979..3837980
Genome browser
AA seq
333 aa
AA seq
DB search
MDRIKEIVANINQGTPKPIYFLMGDEPYYIDKISKYISDNVLTEDEKGFNQMVLYGRETS
VDDVISNAKRFPMMAQHQVVIVKEAQHLSRNIENFSSYVENPQPTTILVICYKYKKLDKR
KKLYKTIQKNGELFESKKLYENQVSEWIRRTLSGRKRKISPKACMLLVEFLGTDLSKISN
ELDKLAIVVPETTEITPELIEQHIGFSKDFNNFELKKAIGERNVGKATRIINYFSQNPKD
NPFVVTITLLNTFFTQLLQYHGLNDHSPGNVAKALGINPYFVNEFTVAAKNYPMKSVSGI
ISSLRQLDLKSKGVGANNIAQADLLKELLVKIA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggatagaataaaggaaattgttgcaaacattaatcagggaacaccaaaacccatttat
tttttaatgggtgatgagccctattatattgacaagatttcaaaatacatttctgataat
gtgttgacggaagacgagaaaggattcaaccaaatggttctttatggaagggaaaccagc
gtagatgatgtaatttcaaatgccaaacgctttccaatgatggctcagcatcaagttgtc
attgtcaaagaagcgcagcatctttctcgcaatattgaaaacttcagttcttatgttgag
aacccgcaacctaccaccatacttgtaatctgctacaaatacaaaaagcttgacaaacgt
aaaaagctatataagaccatccaaaaaaatggagaactttttgaaagtaaaaaactgtat
gagaaccaggtttctgaatggataaggagaaccttaagcggaagaaaacgaaaaatctct
cctaaagcctgtatgctacttgttgagtttttaggaactgatttaagtaagatcagtaac
gaattggataagctagcgatagtagtgccagaaacaacagaaattacgccagagttgatt
gagcaacatattgggtttagtaaggacttcaataattttgaacttaaaaaagctattgga
gaaagaaatgtgggtaaggctacccgtattattaactatttttcgcaaaatcccaaggac
aatccatttgtggttacaatcaccttgttgaacacttttttcactcagcttttacagtac
catggacttaatgaccattctcctggtaacgtggccaaagcacttggtataaacccatat
tttgtgaatgaatttactgttgctgcaaaaaattacccgatgaaaagtgtgagtggaata
atctcaagtttacgacagctagatttaaaaagtaagggcgttggagcaaacaatattgcc
caagctgaccttttaaaagaactactcgtaaaaattgcgtag
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