Flavihumibacter fluvii: KJS93_00930
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Entry
KJS93_00930 CDS
T07958
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
flc
Flavihumibacter fluvii
Pathway
flc03410
Base excision repair
flc03430
Mismatch repair
flc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
flc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KJS93_00930 (recJ)
03430 Mismatch repair
KJS93_00930 (recJ)
03440 Homologous recombination
KJS93_00930 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
flc03400
]
KJS93_00930 (recJ)
DNA repair and recombination proteins [BR:
flc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
KJS93_00930 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
KJS93_00930 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
KJS93_00930 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ULQ52879
LinkDB
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Position
complement(222957..224660)
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AA seq
567 aa
AA seq
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MEKRWKLLEAATPEVESLHQKLGISRSICKILVQRGIRDYEAARAFFRPSLDQLHDPMLM
KDMDKAVSRIMKAMKSREKILVFGDYDVDGTTAVASMYQFLLQVYESDRLDFYIPHRYKE
GYGVSKNGIDYAAETGVTLIISLDCGIKSTDLVAYALELGIEFIICDHHQPDPVLPPATA
ILNPKQLDCPYPYKELCGCGVGFKLITALSRHIGLSDEYYLCYLDLVATAIAADIVPVTG
ENRVLSYFGLKKVNEHPSPGIKALIDLAGLSGQPLQANSLIFVIAPRVNAAGRMDDAKIA
VQLFIEKDPEKLKGFANLLHSHNDDRKEADLLITEEALAMIIADQQYTGRKSTMVFQPHW
HKGVVGIVASRLIDRYYRPTIVLTQSGDIVAGSARSVAGFNLYEAIHACREHLIGYGGHF
AAAGMTLEPEKVEAFRSKFEEVVSANITEEQLVPELLIDAEVQFSELKPAFHNIIRQMEP
FGPENTKPLWLARNVRNNGWSRVVKETHIKFTLIQGNITFSGIGFNLAKKFPLLQKDAPV
DIVFTLEENDWNGNKQLQLKVVDLRAG
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagcgatggaaattattagaagcggcaactcctgaggtggaatccctgcaccaa
aagttgggaatcagccggtccatctgcaaaatcctggtccaaaggggcatacgcgattat
gaggctgcccgggcctttttcaggccttcccttgatcaattgcacgaccccatgctgatg
aaagacatggataaagcggtcagccggatcatgaaggccatgaaatcaagggaaaaaatc
cttgttttcggagattatgatgtggatggcactactgcagtagcttccatgtaccagttc
ctgctgcaggtctatgaatcggaccggctcgatttttatatcccccaccggtataaggaa
ggttatggcgtttcaaaaaatggcattgattatgcggccgaaactggtgtcaccctcatc
atttcactggattgcggtataaaatccacagatttagtagcttatgcactggaacttggg
attgaatttattatttgtgaccaccaccagccagacccggtattgccgcctgctacagcc
atcctgaatcccaaacaactggattgcccttatccttataaggaattatgcggatgtggg
gtgggttttaaattaattactgcacttagccggcatatcggattaagtgatgagtactat
ttatgctacctcgacctggtagcgactgcgatagccgccgatattgtgccagtaacaggt
gaaaacagggtgctttcctattttggattaaaaaaagtaaacgaacatccgtctccgggt
atcaaggcgcttatagacctggccgggttaagcggacagcctttacaggccaatagcctc
atctttgtcatcgctccaagggtaaatgcagccggcaggatggatgatgccaaaattgcg
gtccagctcttcattgaaaaagaccccgaaaaattaaaaggatttgccaacctgttgcat
tcacataacgatgaccgcaaagaagctgacctgctgatcactgaggaagcgttggctatg
attatagccgaccagcaatataccggcaggaaatcaaccatggtcttccagccgcactgg
cacaaaggagttgtgggtattgttgcttcaaggctgatcgacaggtattaccgaccgacc
atcgtacttacccaaagcggggatattgtggccggtagcgcccgcagtgtggccggtttt
aatttatatgaagccatccatgcctgccgtgagcaccttattggttatggcggtcatttt
gctgccgcaggaatgaccctggagcctgaaaaagtggaagccttccggtcaaaatttgag
gaagtggtttcagcaaatatcacggaagaacagctggtgcccgagttactgatagatgca
gaagttcaattcagtgaattaaaaccagcattccacaacattatccgccagatggaacca
ttcgggcctgaaaacaccaaaccgctatggctggcaagaaacgtacgcaacaatgggtgg
tctcgggtagtgaaagagacacacatcaaattcaccctcattcagggcaatatcactttt
tcgggaatcggttttaacctggcgaaaaaattcccgttgttacaaaaagacgccccggtg
gatattgttttcacgcttgaggaaaatgattggaacggcaacaaacaattgcagctgaaa
gtagtggatctccgggcaggctga
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