Flavihumibacter fluvii: KJS93_04825
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Entry
KJS93_04825 CDS
T07958
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
flc
Flavihumibacter fluvii
Pathway
flc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
flc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KJS93_04825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
flc03021
]
KJS93_04825
03400 DNA repair and recombination proteins [BR:
flc03400
]
KJS93_04825
Enzymes [BR:
flc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KJS93_04825
Transcription machinery [BR:
flc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KJS93_04825
DNA repair and recombination proteins [BR:
flc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KJS93_04825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
DUF2240
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
ULQ53644
LinkDB
All DBs
Position
1103444..1104442
Genome browser
AA seq
332 aa
AA seq
DB search
MAILNFQKPDKIVLQKANDFEAQFEFRPLEPGYGVTIGNALRRVLLSSLEGFAIVGIRIE
GADHEFATIKGVTEDLTDIILNLKQVRFKKTIDTEVTNEKIVLHIKGKSEFTAGMIQEGT
QSFQIMNPEQLICTMDPSAKLEIELTIGKGRGYVPAEDNKMKDAPLGFIPIDSIYTPIKN
VKYSIENTRVEQRTDFEKLIMDVSTDGTIHPEEAVKQASRILIQHLMIITDENITFDNKE
EKKEDLVDEQTLQLRKVLKTPLEDLDLSVRAFNCLKAAKINSLSELVQYEQEDLMKFRNF
GQKSLAEIEQVLHERGLSFGMDLAKLGIDKED
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggccattttaaactttcagaaacccgacaaaatcgtattgcagaaagcaaatgatttt
gaagcacaatttgaatttcgtccattggaaccaggttacggtgtaaccatcggtaatgcc
ctgcgcagggtattgctgagttcactggagggattcgcgatcgtgggtatcaggattgaa
ggggctgaccatgaatttgccactattaagggtgttacagaagacctgaccgacatcatc
cttaacctgaagcaggttcgtttcaaaaaaactattgacaccgaagtgaccaatgagaag
atcgttctgcacataaaaggcaagagcgaattcactgccggtatgatccaggagggtaca
caaagcttccagatcatgaatcccgagcagttgatctgcaccatggatccttcagccaag
ctggaaattgaattaaccatcggcaaaggccgcggttatgttcctgctgaagacaataaa
atgaaagatgccccactgggttttattcctatcgactctatttatacgcccatcaagaat
gtgaagtatagtatcgagaatacccgtgtggaacaaaggacagatttcgaaaagctgatc
atggacgtgtctaccgatggtaccatccatccggaagaagctgttaaacaagcttcccgt
atcctgatccagcacctgatgatcattactgatgagaacatcactttcgataataaggaa
gagaaaaaagaagacctggtagacgaacaaaccctgcagctacgtaaagtgctgaagacc
ccactggaagacctggatctttctgttcgtgccttcaactgcctgaaagccgcaaaaatc
aactccctcagcgaactggttcagtacgagcaggaagacctgatgaaattccgcaacttc
ggccagaaatcactggcagagatcgagcaggtactgcacgagcgcggactcagcttcggt
atggacctcgcgaaactggggattgataaggaagactga
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