Flavihumibacter fluvii: KJS93_05610
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Entry
KJS93_05610 CDS
T07958
Name
(GenBank) GIY-YIG nuclease family protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
flc
Flavihumibacter fluvii
Pathway
flc03030
DNA replication
flc03430
Mismatch repair
flc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
flc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KJS93_05610
03430 Mismatch repair
KJS93_05610
03440 Homologous recombination
KJS93_05610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
flc03032
]
KJS93_05610
03400 DNA repair and recombination proteins [BR:
flc03400
]
KJS93_05610
Enzymes [BR:
flc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KJS93_05610
DNA replication proteins [BR:
flc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KJS93_05610
DNA repair and recombination proteins [BR:
flc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KJS93_05610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DUF7508
DEDDh_C
GIY_YIG_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ULQ53798
LinkDB
All DBs
Position
1287704..1289029
Genome browser
AA seq
441 aa
AA seq
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MYAIVDIETTGGFAANHGITEIAILLHNGVEEEGRFTTLVNPGQLIPRYIIALTGITNEM
VQSAPRFETVAGKIHELLANRVFVAHNVNFDYSFVKSHLEQCGFDLPVKKLCTVRMARKI
FPGLASYSLGNLCRSLEIPVENRHRAAGDAAATAALFSKMVKEDHQAVIAKMLKGKNADQ
YLPPQVPVEIIEKIPGSPGVYYFENAKKEIIYVGKAINLVKRVKSHFSNNDNSKRKQDLL
RQVSNVRYKVCSSELMALILESQEIRRIWPLFNRSQKKYHHKYGLYAYEDGRGYLQLAID
KKKNHLPAIYTFNWLTEGQAHIRKILGKTEEIEATPGHSLAAEQPAEYNQRIELAIANLR
QNLPSFALVEKDPIATGQFAVYLMEKGQFYGMGFLEAPFSLPLKLQTWKQIIEPSPDNDY
IRGLLYQFAAKPDLSRLDLQD
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
gtgtatgcaattgtagatatagaaactactggtggctttgctgctaatcatggtataacc
gaaatcgccattctattgcataatggtgtggaagaggaggggaggtttacaactctggtg
aatcccggacaattgattccccgttacatcatcgcccttacgggcattaccaatgaaatg
gtacaatctgcgccacgctttgaaactgttgccggtaaaattcatgaattattagctaac
agggtctttgttgcgcacaatgttaacttcgactattcttttgtaaaatctcaccttgaa
caatgcggatttgatttacctgtaaaaaagttatgcacggtacggatggcaaggaaaatc
tttcccggacttgccagttacagtctgggtaatttatgccggtccttagaaatacctgta
gagaaccggcacagggccgcaggagatgcagcagcgacagcagctttatttagtaaaatg
gttaaggaagaccaccaggcagttatcgcaaaaatgttaaaaggtaaaaatgcagatcaa
tatctccccccgcaggttccagtagaaataattgagaaaattccgggtagtccgggcgtt
tattatttcgaaaatgcaaaaaaggagattatatatgttggcaaggcgatcaacctggta
aaaagggtaaagagccatttttccaataatgacaatagtaagagaaagcaggacttgttg
cggcaggtgagcaacgttcgttacaaggtttgctccagtgaattaatggccctgatactg
gagagccaggaaatcaggcggatctggcctttattcaatcgcagccaaaaaaaataccac
cataaatatgggttatacgcctatgaagacggcaggggatacctgcaactggctattgat
aagaaaaaaaatcaccttcctgctatctatacttttaattggttaactgaggggcaggca
catatcaggaagatactgggaaagacagaggaaattgaggcaaccccaggtcactcatta
gcagctgaacaacctgcagaatataatcaacgcattgaattggcaatagccaacctgcga
cagaatctgccaagctttgctttagtagaaaaagacccaatagcaacaggtcaattcgcc
gtttatcttatggaaaaaggacagttttatggtatgggctttttggaagcaccattttca
ttaccattaaagttgcaaacatggaagcaaatcattgaaccctcaccggataatgattat
atccggggactactgtatcagtttgcagcaaaaccagacctttcccggctggacttacag
gattaa
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