Flavihumibacter fluvii: KJS93_14275
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Entry
KJS93_14275 CDS
T07958
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
flc
Flavihumibacter fluvii
Brite
KEGG Orthology (KO) [BR:
flc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
flc03019
]
KJS93_14275
03009 Ribosome biogenesis [BR:
flc03009
]
KJS93_14275
Messenger RNA biogenesis [BR:
flc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KJS93_14275
Ribosome biogenesis [BR:
flc03009
]
Prokaryotic type
rRNA processing factors
KJS93_14275
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
TP0693_C
DnaJ_CXXCXGXG
RNase_E_G_Thio
Motif
Other DBs
NCBI-ProteinID:
ULQ51253
LinkDB
All DBs
Position
3270848..3272398
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AA seq
516 aa
AA seq
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MNKELIINSAPQGVEIALLEDKKLVELHNEKADASFAVGDLYLGKVRKLIPGLNAAFVDV
GFEKDAFLHYTDLSPYAKSLLKFTQQSIADNTAGGFDFGRFEVEAEIVKTGKINEVLGGK
PNVLVQILKEPIAAKGPRLSCEISLPGRFVVITPFNDVVAVSRKIHSSDERKRLQKIIEA
IKPKNFGVIVRTAAEGKNTAELHEDLLALVDTWKAIQHNLIGAVAPAKILSEQTKATSML
RDLLNEDFNRIVVNDRNIYNDTKSYIQRIAPDKAEIVTYHHNGSPIFDQFGITKQVKAAF
GKTVNLPSGAYLIIEHTEALHVIDVNSGYKSVSNNQEQNALETNLEAAEEIARQLRLRDL
GGIIVADFIDMKLPENKKRLLDAMEGFMKTDRAKHAVLPISKFGLMQITRQRMKPEININ
TMEVCPSCHGTGKISSALVLEDEIEKNLNYLITHKHSNLTLAVHPIMHAYLTKGWIFSKL
WRWKRTFKQNIKLHANSNYHLTEFHFFDSHEEEIKL
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
ttgaacaaggaattaattattaactccgcgccacagggcgtggagatcgctctcctggaa
gacaaaaaactggtagaactgcacaatgaaaaagcagatgccagttttgctgttggggat
ttgtatttaggcaaggtaagaaaactcatacctggattaaacgctgcatttgttgatgta
gggtttgaaaaggatgcttttttgcactatactgatctaagtccctacgctaaatctctc
ctgaaatttacccagcaatccattgcagataatactgcagggggatttgattttgggcgt
tttgaagtggaagccgagatagtgaagacgggaaagatcaatgaggtactcggtggaaag
ccaaatgtacttgtgcagatccttaaggaacccatagccgcaaaggggccaaggctcagt
tgcgaaatctctttgccgggccgatttgtggtgatcacccccttcaatgatgtggtggcc
gtttcccgcaagatccattcttcagatgagcggaaaagactgcaaaaaattattgaggcc
atcaagccgaagaattttggcgtgatcgtacgtacagctgccgaaggcaagaatactgct
gaattacatgaggacctcctggccctggtagatacctggaaagcgattcagcacaacctg
ataggtgctgtagcccctgctaaaatactgagtgaacaaaccaaggcaaccagtatgctc
cgtgatttgctcaatgaggatttcaaccgcattgtagtgaacgaccgcaacatttataac
gatacaaagagttatatccagcgtattgcccctgataaagcggaaattgtaacctatcac
cataatggctcacccatttttgaccagtttggaattaccaagcaggtaaaagcggctttt
ggtaaaacggtgaacctgccaagcggcgcttacctgattattgagcatacagaagcgctt
catgttattgatgtgaacagcggttacaaaagtgtcagcaataaccaggaacagaatgct
ctggaaaccaacctggaagcggctgaagagatcgcccgccagttacgtctacgtgatctt
ggtggtattatcgtggccgatttcattgatatgaaattgccggagaacaagaaacgcctg
ctggatgcgatggaaggttttatgaaaaccgaccgggcaaagcatgcggtgttaccgatc
tccaaattcggattgatgcaaattacgcggcagcggatgaagcccgagatcaatatcaat
acgatggaagtatgtccgagttgccatggcaccggaaaaatatcttccgcattggttttg
gaagatgagattgaaaagaacctcaactacctgatcacgcataagcatagcaatttaacg
ctggcagttcacccgatcatgcacgcttacctaaccaaaggatggatcttcagcaagctt
tggagatggaaaaggacattcaaacagaatatcaagttgcacgccaattccaattatcac
ctgaccgagtttcatttttttgattcccacgaagaagagatcaaattataa
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