Flavihumibacter fluvii: KJS93_16520
Help
Entry
KJS93_16520 CDS
T07958
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
flc
Flavihumibacter fluvii
Pathway
flc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
flc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KJS93_16520 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
flc03019
]
KJS93_16520 (recQ)
03400 DNA repair and recombination proteins [BR:
flc03400
]
KJS93_16520 (recQ)
Enzymes [BR:
flc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KJS93_16520 (recQ)
Messenger RNA biogenesis [BR:
flc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KJS93_16520 (recQ)
DNA repair and recombination proteins [BR:
flc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KJS93_16520 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
Helicase_C
RecQ-1-like_HTH
RecQ_Zn_bind
HRDC
ResIII
HTH_40
Motif
Other DBs
NCBI-ProteinID:
ULQ51697
LinkDB
All DBs
Position
3797856..3800171
Genome browser
AA seq
771 aa
AA seq
DB search
MATSTKSRKTAATKPEAKNTTAKTPKAAKSRAAGSPTNSELSGKLPEYLEEYFGFSQFKD
EQEAIIQNLLAGKDTFVIMPTGGGKSLCYQLPAMILPGVAIIVSPLIALMKNQVDLVRGY
SSNDEVAHFLNSSLTKKETREVHDDLLNGRTKMLYVAPETLTKQENLDFFNDLEISFFAV
DEAHCISEWGHDFRPEYRRLREMMDEINKDVPVIALTATATPKVQSDILKNLGLRDPKVF
ISSFNRDNLYYEIQPKVKKEQTIKSMVKFIVNFEGKSGIIYTLNRKTTEELAEVLVANGI
KAVAYHAGLDSKLRAERQDMFLKEDTQVIVATIAFGMGIDKPDVRFVMHYNIPKSIENYY
QETGRAGRDGLEGICILYYSHKDVSKLEHLMRDKPLSEREVGAQLINETVAYAESGVCRR
KILLNYFGEKYDVENCGHCDNCKHPKEHLEARADAVKVLKLIKALDESFATDYAVNILVG
RLTPANHMYKHNTLDLFGVGKTQTDQYWGSLIRQMLLAGFLSKDIEEYGVLKMTKAGEAF
LKKPKSFKIVMNNLFEDANEDDEDGDGEGGGPLAADEKLFGMLKDLRQVEAKKKGLPPFV
IFLENSLQDMATLYPTAVSELDKCQGVSKGKALRYGKPFVEMIAKYVEENNIEKPDEFVM
KSVVNKSGLKVYIIQQTDKRIPLETIAKNKELRLDTMLEEMETIAASGTKLNLDYAIDEM
LDEYEQEEILEYFKGCETSSLQIAQEELADSNFTWEQLKIMRIKFLSQYGM
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atggcaacatcaacaaaatcccggaaaaccgcagcaacaaaaccggaagcaaaaaatact
actgcaaaaacacctaaagccgccaaatcaagggcggccggatcccctaccaatagtgag
ttgtctggcaaactgccggaatacctcgaagaatattttggtttttcccaattcaaagat
gagcaggaagccatcatccaaaaccttttggctggcaaggacacttttgtgatcatgcct
actggcggtggtaaaagtttatgttaccagttgcccgcaatgatcctgcccggggtggct
atcatcgtttccccgctgatcgccctgatgaaaaaccaggtggacctggttcgcgggtac
agcagcaatgatgaagtggcgcatttcctgaactcctcgctcaccaagaaggaaacgcgc
gaagtacatgatgacctgctgaacggccgcaccaaaatgttatacgtggcgcctgaaacg
ctcaccaagcaggagaacctcgattttttcaatgacctcgagatttcctttttcgccgta
gatgaagcgcactgtatttccgaatggggccatgatttccgcccggagtaccgccgcctg
cgtgagatgatggatgagatcaataaggatgtgccggtcattgccctcacggcaacggct
accccaaaagtacagagtgatatcctgaagaacctgggcctgcgcgatccgaaggtcttt
atttcttccttcaaccgcgataacctgtattacgagatccagcccaaggtgaagaaggaa
cagaccatcaaaagcatggtgaagttcatcgtgaattttgaagggaagagcgggattatt
tataccctcaaccgcaagaccacggaagaactggctgaggtactggtggctaacggcatt
aaagcggtggcctaccatgccggactggacagcaagctgcgggcagaacgccaggatatg
tttttgaaagaagacacccaggtgattgtggccactattgccttcgggatgggtatcgac
aagcccgatgtgcgctttgtgatgcactataatatccccaagagtattgagaattactac
caggaaacgggccgtgcgggccgcgatggactggaaggcatctgcatattatactattcc
cacaaggatgtgtcgaaactggagcacctgatgcgggacaaacccctgagtgagcgggaa
gttggcgcacaactgatcaatgaaaccgtggcctatgcggaaagtggtgtctgcaggcgg
aagatcctgctgaattatttcggcgagaagtacgacgtggagaactgcggccattgcgat
aattgtaaacacccgaaagaacatctggaggcccgggccgatgccgtaaaagtgctgaaa
cttataaaggccctggacgaaagctttgccactgattacgccgtgaatatcctggtaggc
cggttaacacccgccaaccacatgtacaagcacaataccctcgatttatttggggtgggt
aaaacccagaccgaccagtactggggttccctgatccggcagatgttgctggcgggattc
ctgtccaaggatatcgaggaatatggtgtgctgaaaatgacgaaggccggcgaagccttt
ctgaagaaaccgaagagcttcaagatcgtcatgaacaacctgtttgaggatgccaatgag
gatgacgaagatggcgatggtgaaggcggcggcccgttggcagctgatgagaagttgttt
gggatgctgaaggacctgcgccaggtggaagccaaaaagaaaggcctgcccccgtttgtg
atcttcctggagaactccctgcaggatatggcgacgctctatcctactgcggtgagtgag
ctggataaatgccagggggtcagcaagggtaaggccttacgctatggcaagccctttgtg
gaaatgatcgccaaatatgtggaagagaacaatattgagaagcccgatgagttcgtgatg
aagagtgtggtgaacaagagcgggttgaaagtatatattatccagcagaccgataagcgg
atcccgctggagaccattgcgaagaataaggaattgcggctggataccatgctggaagag
atggagaccattgcggccagcggcaccaagctgaacctggattatgccatcgatgagatg
ctggacgagtatgagcaggaagagatcctggaatatttcaagggctgtgagacctcttcg
ctgcagatagcgcaggaggagctggccgacagcaatttcacctgggagcagctgaagatc
atgcgcatcaagttcttatcgcaatacgggatgtag
DBGET
integrated database retrieval system
