Flavihumibacter fluvii: KJS93_17580
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Entry
KJS93_17580 CDS
T07958
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
flc
Flavihumibacter fluvii
Pathway
flc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
flc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
KJS93_17580 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
flc03400
]
KJS93_17580 (xseA)
Enzymes [BR:
flc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
KJS93_17580 (xseA)
DNA repair and recombination proteins [BR:
flc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
KJS93_17580 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
MscS_porin
Motif
Other DBs
NCBI-ProteinID:
ULQ51903
LinkDB
All DBs
Position
complement(4045210..4046535)
Genome browser
AA seq
441 aa
AA seq
DB search
MSSPLRLSQLSLLLQEVISETFSFRRFWVVAEISNHSFYAQKGFHYFDLIETEKAGLKSK
GSLITKMAAVAWSAGAARIKAFEAATGQRFGNDLQVLAEVTVDFHPVYGLKLTLVDIDPR
FTLGLLEQQRQATINRLLDELPDYIWKEGERIMTFNQDLQLPVVIQRVAIISSSTAAGYE
DFLHSLEENPFGYHFITHAFFTTVQGENNAPALAASVEKIVSRAEEDGLDYDAVVIIRGG
GASTDLLIFDQFEIAAAVASCPFPVITGIGHLKNETITDLVANTALKTPTKVAEFIIQHN
RTFENSLTGLQQSLIIHAQQYMTGAKQELQSLRSALAYQTQANIFHHRSVLQQVESSIKR
MPGEYLRNKQANVDNLVRLFKMASPEKVLQRGFAIIELKGKIISDAATVSIGDELTIILS
GTAIDSTVHQKKPYNGKPFEL
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgccacttcgtttatcacaactcagcctgctgctccaggaggtcatcagcgag
acattttccttcaggcggttttgggtagtagccgagatcagcaaccatagcttctatgcc
caaaaaggctttcattattttgacctcattgaaacagaaaaggccggactaaaaagcaag
ggcagcctcatcacaaaaatggctgcggtagcatggagtgccggcgctgcccggatcaag
gcatttgaagcagcaacgggccagcgttttgggaacgacctgcaggtgctcgcagaggtt
acggtagattttcatccggtatacggattgaagctgaccctggtggatatcgatccgcgt
tttacccttggcctgctggaacaacagcgacaggccaccatcaacaggttgcttgatgaa
ttacccgattatatctggaaagaaggtgagcggatcatgacctttaaccaggacctgcag
ctaccggtggtgattcagcgggtagcgatcatcagttcatctacagctgcgggttatgaa
gatttcctgcatagcctggaagaaaatccatttggctatcattttattacccatgcattt
tttacgacggttcagggagaaaataatgcgccggcccttgctgccagtgttgaaaagatc
gtcagtcgtgctgaggaagacgggctggattatgatgcagtagtcattatacgcggtggc
ggtgccagtacagacctgctgatctttgaccagtttgagatcgctgcggctgttgcctcc
tgcccatttcccgtgatcaccggcattggccacctgaaaaatgaaaccattaccgacctg
gtggccaataccgcccttaaaacgcctacaaaagtggcggagtttattatccagcataac
cgcacatttgaaaacagcctcacgggattacagcaatcactgatcatccatgcacaacaa
tatatgactggcgccaaacaggaattgcaatcgttaaggtctgcactggcgtaccagaca
caagccaatatcttccatcaccggtcggttttacaacaggtggaatcatccattaaaagg
atgcccggggaataccttcggaataaacaggcaaacgttgacaacctggtgcggcttttt
aaaatggcatcgccggaaaaggtattgcagcgtgggtttgcgatcattgaattgaaagga
aaaatcatttctgatgctgcaactgtcagcattggcgatgaactgaccattatcttatca
ggcactgccatcgacagtaccgttcaccaaaaaaaaccctacaatggaaaaccatttgaa
ctatga
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