Flavihumibacter fluvii: KJS93_21065
Help
Entry
KJS93_21065 CDS
T07958
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
flc
Flavihumibacter fluvii
Pathway
flc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
flc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KJS93_21065 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
flc03019
]
KJS93_21065 (rny)
Messenger RNA biogenesis [BR:
flc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KJS93_21065 (rny)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
HDOD
KH_1
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
ULQ52582
LinkDB
All DBs
Position
complement(4856663..4858228)
Genome browser
AA seq
521 aa
AA seq
DB search
MDSTILVIIAGVIALVVGIVAGKFIFKANTDQKILEAELQAKKLLNDAQLQAETLKKEKL
LEAKERFVQLKSEHDKEVLERNRKLGDSENRVKQKEVTINQKEGNIDKQIKENEAIKENL
NRQIELVNIKRTELEKHQEEHIRRLEKIAGLTAEEAKTQLVESLKQEAHTQALGIQQEII
DDAKQKANKEARKIIIQTIQRTAAEQAIENSITVFNLESDEIKGQIIGREGRNIRAIEAA
TGVDLIVDDTPEAIILSSFDPLRREIARLSLTRLVTDGRIHPARIEEVVEKTRRQIEEQV
MEIGERTVIELGIHGLHKELVRIVGKMRFRSSYGQNLLMHSREVANLCGIMASELGMNPK
LAKRAGLLHDIGKVPDEESELSHALLGAKLAEKYGENPAVVNAIGAHHDEMEMQYVISPI
VQACDAISGARPGARREIMQQYLQRIKDLENMAMGYQGVEKAYAIQAGRELRVIVEADKV
TDADSDRLSFEIAQKIQTEMTFPGQIRVTVIREKRAVNVAR
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggactcaacgatattggtaataattgccggcgtcatcgccctcgtagtgggcatcgtg
gcgggtaaatttatctttaaagcgaacaccgatcaaaaaatcctggaagccgagcttcag
gctaaaaaactcctaaatgatgcacaattacaggccgagacccttaaaaaggaaaaacta
ctagaagcaaaagaacgtttcgtacaactaaaaagtgagcatgacaaggaagtgctggag
cgtaaccggaagctgggcgattctgaaaacagggtcaaacagaaagaagtaaccattaac
cagaaagagggcaatatcgacaaacaaatcaaagagaatgaggcgattaaggaaaacctt
aaccgtcagatcgaactggttaatataaagcgaacggaactggaaaaacaccaggaagag
catatccggagacttgaaaaaatagccggtctgactgctgaggaagcaaaaacccagctg
gtagaaagcctaaaacaagaggcgcatacgcaggcactcggcatccaacaggaaattatt
gatgatgcgaagcagaaagccaataaagaggcacgtaaaataataatccagaccatccag
cgcacagcagcagagcaggccatcgaaaactctattaccgttttcaatctggaaagcgat
gaaataaaaggccagatcattggaagggagggccgtaatatcagggctattgaggcagct
acaggggttgacctgattgtagatgatactccggaggcaatcatcttatcttcatttgac
ccgctccgcagggagattgcacgccttagtttaacccgactggttactgatggccggatc
caccctgcacgtattgaggaagtcgtggaaaagacccgtcgccagatcgaagagcaagtt
atggaaatcggtgaaaggacagtaatcgaactgggtatccatggactccataaggaattg
gtaagaattgtcggtaaaatgaggttccgttcatcttatggccagaacctattgatgcac
agtcgcgaagtagcgaacctatgcggcatcatggcatctgaactgggcatgaatccaaaa
ttggcgaaacgggccggattacttcatgatattggtaaagtaccggatgaagaatctgaa
ttgagccatgcactacttggagcaaagctggctgaaaaatatggtgaaaatccagcggtg
gtaaatgccatcggtgcccaccacgatgaaatggagatgcaatatgtcatttcccctatc
gtacaagcctgtgatgccatcagtggtgctcgtccaggcgcacgccgggagatcatgcaa
caatacctgcagcggattaaggaccttgaaaacatggcaatgggttaccagggtgtggaa
aaagcttatgccatccaggctggacgtgaattacgggtaattgtagaggctgataaagta
acagatgcagatagcgatcgcttaagtttcgagatcgcccagaaaatacaaactgaaatg
acttttccaggacagatcagggttacagttattcgcgagaaaagagcggtgaatgtagcc
cggtag
DBGET
integrated database retrieval system