Flagellimonas sp. MMG031: ABNE31_00480
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Entry
ABNE31_00480 CDS
T10636
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
fld Flagellimonas sp. MMG031
Brite
KEGG Orthology (KO) [BR:
fld00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fld03032
]
ABNE31_00480 (topA)
03400 DNA repair and recombination proteins [BR:
fld03400
]
ABNE31_00480 (topA)
Enzymes [BR:
fld01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ABNE31_00480 (topA)
DNA replication proteins [BR:
fld03032
]
Prokaryotic type
DNA Topoisomerases
ABNE31_00480 (topA)
DNA repair and recombination proteins [BR:
fld03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ABNE31_00480 (topA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Motif
Other DBs
NCBI-ProteinID:
XBQ23406
LinkDB
All DBs
Position
complement(107087..109567)
Genome browser
AA seq
826 aa
AA seq
DB search
MPKNLVIVESPAKAKTIERFLGKEFQVESSFGHIADLPSKELGVDVENDFKPKYTVDKEK
KALVKKLKDLAQKAETIWLASDEDREGEAISWHLAEELGLDKKKTKRIVFNSITKSAIQK
AIENPRDINYNLVNAQQARRVLDRLVGYELSPVLWKKIKPGLSAGRVQSVAVRLIVERER
EIEAFTPEASFRIKAEFKTDGGSTFGAKLNTTFPTKEAAEQFLKENIGADFSVSDLAKKP
AKKSPAAPFTTSTLQQEASRKLYFSVSRTMQVAQRLYEAGLITYMRTDSVNLSNEALAAA
KEAILENYGQKYSQTRNFTGKTKGAQEAHEAIRPTDMKLQSPQLERDQAKLYELIWKRTL
ASQMSDAQLERTNVKIKASTHSEEFSANGEVVKFDGFLKVYLEGTDDEDSEEQDGMLPAM
KVGEPLQNVFISATERFTRPPYRYSEASLVKKLEELGIGRPSTYAPTISTIQNRGYVEKG
TVEGTERKYAELVLESEKIKTSTLTEMVGSEKGKIVPTDIGMIVNDFLVTHFTQILDYNF
TAQVEEDFDEIASGEEDWQEMMKNFYNDFHPNVLEVEENAERASGERVLGTDPKSGRQVS
VRLGRFGPMVQIGTVDDEEKPEFASLLPDQSIGTITFEEAMTLFDLPRKLGVYEGEEVEA
NVGRYGPYVRFGKKFISLAQGESAFDVDMERAIELIKEKQKADAPIASYEGKEVTKGKGR
FGPFIKWDGMFINVNKKYDFDNLSNDDIVELIEAKKKKEAEKVVQEWPEEKIRIEKARWG
RHNIIKGRVKVELSKDVDATKITLEEAQALLDKKAPKKKAKTKAKK
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagaatttagttattgtagagtcccccgccaaagcaaagaccatcgaaagattt
ctaggaaaggaatttcaagtggagtcgagttttggacatattgccgatcttccttccaag
gagctgggcgttgatgtagagaatgattttaagccaaaatataccgttgataaggagaaa
aaggcacttgtaaaaaaactcaaggacttggcccaaaaagcggaaacgatttggttggcg
agtgatgaggaccgtgagggggaggccatttcttggcatttggccgaagaactgggactg
gacaagaagaagaccaagcgaattgtttttaattccattaccaaatcggcgatccaaaag
gccattgaaaatccgagggacatcaattacaatttggtcaatgcccagcaggccagaagg
gtgttggaccgtttggtggggtacgagctttcgcctgtgctttggaaaaaaataaaaccg
ggactttctgccggccgtgtacaatcggtagcggttaggttgatcgtggagcgtgagcgt
gaaatcgaagcatttacgccagaagcctcgttccgcatcaaggccgagttcaaaaccgat
ggtggcagcacctttggggctaagctgaacaccacgttcccaaccaaagaagccgcagag
cagtttttgaaagaaaatatcggagcggacttttcagtttccgatttggccaaaaagcca
gcaaaaaaatctccggcagcgccatttaccacttccactttgcaacaggaagcgtcgaga
aaactttatttttcggtaagccgcactatgcaggtagcgcagcgtttgtacgaagcaggt
ttgattacttacatgagaacggatagcgtcaatttgtccaatgaggctttggcagcggca
aaagaggccatcttggaaaattatggccaaaaatacagtcaaaccagaaactttacgggt
aagaccaagggggcacaggaggcacacgaagccatccggcccactgatatgaaattacag
tcccctcaattggaacgagatcaggccaaattatatgaattgatttggaaacggacgctt
gcttcgcaaatgagcgatgcccaattggaacgcaccaacgttaaaataaaggcaagtacc
catagcgaagaattctctgcaaatggtgaggtagtcaaatttgatggtttcctcaaggtg
tatttggaagggaccgatgatgaagatagcgaagaacaggatggaatgctgcccgctatg
aaagtgggagagccgcttcaaaatgtatttatttccgcgaccgagcgattcacccgccca
ccctaccgctattccgaggcctccttggtgaaaaagttggaggaactgggtatcggtcga
ccatccacatacgcgcctaccatatccaccattcaaaataggggatatgtggaaaaaggc
accgtagaaggtaccgagcgaaaatatgcggaactggtattggaaagcgaaaagataaaa
accagtacacttaccgaaatggtaggttccgaaaaagggaaaattgtacctacagatata
ggtatgatcgtgaacgatttcttggtgacccacttcacccagattctcgactataatttc
acggctcaggtggaggaggatttcgatgaaattgcatcgggcgaagaggattggcaggag
atgatgaagaatttctataacgattttcatcccaatgtgctagaagtcgaagaaaatgca
gaacgcgcaagtggtgaacgtgtcttgggaaccgaccctaaatcgggccgacaggtatcg
gtgagattgggccgttttggtcccatggttcaaatcggaactgttgatgacgaggaaaaa
ccggaatttgccagtttgttgcccgatcaatcgataggcaccattacgtttgaagaggcc
atgaccctttttgatttgccacgtaaactgggcgtctacgaaggtgaggaagtggaggcc
aatgtggggcgctacggaccctatgtgcgttttggaaaaaagttcatctcactggcgcag
ggagaaagtgcttttgatgtggacatggaacgcgccatagaactgatcaaggaaaaacaa
aaggcagatgcgcccattgccagctatgaaggcaaagaggttaccaaaggtaaaggtagg
ttcggaccgttcattaaatgggacggtatgttcattaatgtgaacaagaagtatgatttc
gacaatttgtccaatgatgacattgttgaactcattgaagccaaaaaaaagaaagaagct
gaaaaggtcgttcaggaatggcccgaagaaaagatcaggattgaaaaagcccgctggggg
cgtcataatattataaaaggtagggtaaaggtggaactttccaaggatgtggatgccaca
aaaataaccttggaagaagcacaggccctattggataaaaaagcaccaaagaaaaaagcc
aagacaaaagcgaagaaataa
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