Flagellimonas sp. MMG031: ABNE31_02360
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Entry
ABNE31_02360 CDS
T10636
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
fld Flagellimonas sp. MMG031
Pathway
fld03410
Base excision repair
fld03430
Mismatch repair
fld03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fld00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ABNE31_02360 (recJ)
03430 Mismatch repair
ABNE31_02360 (recJ)
03440 Homologous recombination
ABNE31_02360 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fld03400
]
ABNE31_02360 (recJ)
DNA repair and recombination proteins [BR:
fld03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
ABNE31_02360 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ABNE31_02360 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ABNE31_02360 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
LsmAD
Motif
Other DBs
NCBI-ProteinID:
XBQ23769
UniProt:
A0AAU7MZJ2
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Position
complement(528443..530131)
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AA seq
562 aa
AA seq
DB search
MRWTIKPKPEQEAIDQLSEALGVENLVAQLLIQRGITNFEEAKAFFRPELTHLHDPFLMK
DMDKAVQRIEQAIAKGENMLVYGDYDVDGTTSVALMSSFLVETYPNVATYIPDRYLEGYG
ISFQGIDFAADNDVSLMIALDCGIKAIDQIKYAKEKGIDVIVCDHHRPGQQLPEAVAVLD
PKQEDCEYPYKELCGCGVGFKLIQALASKQGKTIKDLMPYLDLVATAIAADIVPITGENR
VLAHYGLQVINEHPRTGIKALIDQTKKRELTITDVVFIIAPRINAAGRMKHGQHAVTLLS
ETNFAQAQQYAAEIELFNTERRSLDQEITQEALVQIQENQEEDKFTSVVYNENWHKGVIG
IVASRLTETYYRPTLVFTKSGDKLAASARSVKGFDIYNALEGCSDCLEQFGGHMYAAGLT
LLEEQYEAFKNQFEKVVSETIDPKLLQPEIAVDAKIAMHQITPKLMRILKQFAPFGPGNM
TPIFMAEGLKDTGYARGVGEDEKHLKCSVYQPGSNPIGAIGFNLGDKLNVVKRIKPFDAV
FSLDENEWNGTVSLQLKLRDIR
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgcgctggaccattaaaccaaaacccgaacaagaagccattgaccaactttccgaagca
ttgggtgtggagaatttggtggctcaactgttgattcagcggggaattaccaatttcgag
gaggcaaaagcatttttccgaccagagttgacccatttgcatgacccttttttgatgaag
gacatggataaggccgtccagcggattgagcaagccattgcaaagggcgaaaatatgttg
gtgtatggcgattacgatgtggacggcacgacttccgtagcattaatgagctcctttttg
gtggaaacctatcccaatgtagcaacctatattcctgaccgctacttggaaggatatggt
atttcctttcagggaattgattttgcagcagataatgatgttagcctaatgattgccctg
gattgtggcatcaaggccatcgaccaaataaaatacgccaaggaaaaggggattgacgtc
atcgtttgcgatcaccaccgaccagggcagcagctgcccgaagccgttgccgtgttggac
cccaaacaggaggattgtgaatacccgtacaaggaactttgcggttgtggggtaggcttt
aagttgattcaggcccttgcttccaaacagggcaaaactatcaaagatttaatgccatat
cttgatttggtggccactgccattgcggccgatattgttcccatcacaggcgaaaatcgt
gtattggcccattatgggttacaggtcatcaacgaacatccgagaacaggaatcaaagcg
ttgattgaccaaaccaaaaaacgggaacttaccattacggatgtggtgtttatcattgcc
cctcgcatcaacgctgctggacggatgaaacatggtcaacatgccgttaccttgcttagc
gagaccaattttgcacaagcgcaacaatatgctgccgaaatcgaattgtttaataccgaa
cgaagaagtttggaccaagaaattacccaagaagccttggtacagattcaggaaaaccaa
gaagaagataagtttacctcggtggtctacaacgaaaattggcacaagggagtcatagga
atcgtggcctcacgattaaccgaaacctattacagacctactttggttttcactaaaagc
ggggacaaattggctgcttcggcccgttcggtcaaaggatttgatatttacaacgcgctt
gaaggctgttccgattgcttggagcagttcggcggacatatgtatgctgcaggacttacg
ctattggaagaacagtacgaggccttcaaaaatcagtttgaaaaagtggtttcggaaacc
atcgaccctaaactgttgcagcccgagattgctgtggatgcaaaaatcgctatgcatcag
attacacccaaattgatgcgcatcttgaaacaatttgccccttttggcccagggaacatg
accccgatttttatggccgaaggtttaaaagacaccgggtacgcacgaggcgtaggagaa
gacgaaaagcacttaaagtgtagcgtatatcagcccggttccaatcctattggcgccatt
gggtttaatttgggcgataaattgaatgtggtaaagcgaataaaaccgtttgatgccgta
ttttcgttggatgaaaacgaatggaacggaacggtgagccttcaactaaaactaagagat
attcgctag
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